Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g03432 | ATGGCCTTTGAGCACTGCGTTTCGCAGCAATGGAAAACCATCCCAAGCCCCGTGACTGTGACAGAAAATTTTGATGGGTGTTTTGATTGCAATATCTGCTTAGATTTTGCACATGAACCAATTGTTACCCTCTGTGGTCACCTATACTGCTGGCCTTGCATCTACAAGTGGCTCCATGTCCAAAGTGCTTCTCTTGCACCTGATGAGCACCCACAATGCCCTGTTTGCAAGGAAGATATATGCCACACCACAATGGTTCCTCTCTATGGCCGTGGCCAGGCCATAGCTCATAGTGACCGTGATGTGAAGGCTTCCTATAGAGGTGTTTTCATTCCACCAAGACCACCTGCTTTGGGTACTCAATCTCTCGTGCCACCATCATCTCAAAGTGGTCAGCAACTTCCATATCGTAATCCTTATCAGAGTCAGCATTTCAACCCTCCTTTATACCAAGAAGAGGATGAATCATCATCACAAATGCTTCTCAGTCCTGGTGCAATGGCACCAGGGTTCCCCCACCTCGTGGTTGGGATGTTTGGAGAGATGTTTTATACCCGAGTCTTTGGCAACTCAGAAAATGTATACACTTACCCAAATTCTTATCACCTGGCAGGAAGTAACAGCCCCAGGTTGAGAAGGCAAGAGATGCAGGTAGACAAATCACTGAATAGAATTTCAGTTTTTCTCTTCTGTTGCTTCCTTCTATGTCTCATCGTCTTCTAA | 723 | 0.4592 | MAFEHCVSQQWKTIPSPVTVTENFDGCFDCNICLDFAHEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEHPQCPVCKEDICHTTMVPLYGRGQAIAHSDRDVKASYRGVFIPPRPPALGTQSLVPPSSQSGQQLPYRNPYQSQHFNPPLYQEEDESSSQMLLSPGAMAPGFPHLVVGMFGEMFYTRVFGNSENVYTYPNSYHLAGSNSPRLRRQEMQVDKSLNRISVFLFCCFLLCLIVF* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g03432 | 240 | SMART | ring_2 | 30 | 76 | IPR001841 | - | |
Phac2g03432 | 240 | Pfam | Zinc finger, C3HC4 type (RING finger) | 30 | 76 | IPR018957 | GO:0046872 | |
Phac2g03432 | 240 | ProSitePatterns | Zinc finger RING-type signature. | 45 | 54 | IPR017907 | - | |
Phac2g03432 | 240 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 106 | IPR013083 | - | |
Phac2g03432 | 240 | ProSiteProfiles | Zinc finger RING-type profile. | 30 | 77 | IPR001841 | - | |
Phac2g03432 | 240 | SUPERFAMILY | RING/U-box | 22 | 90 | - | - | |
Phac2g03432 | 240 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 8 | 237 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Phac2g03432 | 240 | FunFam | E3 ubiquitin-protein ligase RMA1H1 isoform A | 6 | 131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g03432 | Phac-Chr2 | 35685309 | 35687978 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g03432 | 7 | 226 | C3H Transcription Factor Family | AT4G27470 | 39.640 | 1.04e-44 | 148 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g03432 | K10666 | - | gmx:100779793 | 413.69 |