Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03430 ATGGCGAGTCTGTTTGGCTCATCGTCTTCCGCTCCGTTCAAGATGAGAGTCACCAACACGCCCTCCAGCGACCTCGTTCTCACCAACCTCGCCTTCTGTTCCCCCTCCGATCTTCGCAACTTCGCCGTTCCCGGCAACGACCAGATTGGGTTGAACTCCATTCAACGGCGGTGTGCCAAAGTTTCTAGTGGTGATTCCGTACAATTGACTCGATTTGTGCCTCCCGACGACTTCAACCTCGCACTGTTGACCATTGAGTTGGAATTTGTTAAAAAGGGGAATAAGAGTGAGCAGATTGATGCTGTTCTACTGGCTAAGCAACTTCGGAAGAGATTTTTAAACCAGGTTATGACTGTGGGGCAAAAAGTGTTATTTGAGTACCATGGAAATAACTATAGCTTTACTGTCAGTCAAGCTGCAGTTGAAGGCCAACAAAAGTCCAATTCTCTTGAAAGAGGGTTGATTTCTGATGACACATACATTATTGTCAATCAACGGGAGGGTGCAACTAGCAACATTTTCAAGCAGAAAGAATTTAACCTTCAGTCACTGGGTATTGGTGGTTTGAGTGCAGAATTTGCTGATATATTTCGAAGAGCTTTTGCCTCTCGTGTTTTCCCTCCCCATGTGACATCTAAATTAGGAATCAAGCATGTGAAGGGCATGCTTCTTTATGGGCCTCCTGGAACTGGAAAGACACTTATGGCACGTCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTTGGTGAAACTGAAAAGAATGTGAGAGACCTTTTTGCTGATGCTGAACAGGATCAGAGGACCCGAGGGGATGAAAGTGATTTGCATGTTATAATCTTTGATGAAATTGATGCTATTTGTAAGTCAAGGGGTTCAACTCGGGATGGTACTGGAGTTCATGACAGCATTGTAAATCAGCTTCTTACTAAGATAGATGGTGTGGAGTCACTCAATAATGTTTTGCTTATTGGAATGACTAACAGAAAGGATATGCTTGATGAAGCTCTCTTAAGACCCGGGAGATTGGAAGTGCAGGTTGAGATAAGCCTTCCTGATGAAAATGGTCGATTGCAAATTCTTCAAATTCACACTAACAAAATGAAAGAGAATTCTTTTCTAGCTCCTGATGTGAACCTTCAAGAGCTTGAAGGTTACATGGTGACTACAGGAATGATGGAATCAAGAGTGGAGGCTTTGGAAAAGACTTTAGTCACAAGGTTTCACCTACCCGTAGCTGCTCGAACAAAAAACTACAGTGGTGCAGAACTTGAAGGTGTTGTGAAAAGTGCCGTGTCATATGCTTTAAATAGACAATTGAGTCTGGATGATCTCACTAAGCAAGTGGATGAAGAGAACATTAAGGTTACAATGGATGACTTTCTGAATGCACTCCATGAAGTTATTCCTGCATTTGGTGCTTCAACTGATGATCTTGAAAGATGCAGACTCCATGGCATGGTGGACTGTGGTGATCGACATAAGCACATTTATCAAAGAGCAATGCTACTTGTGGAGCAAGTTAAAGTGAGTAAAGGAAGCCCACTTGTCACTTGTCTCCTGGAAGGATCCCGTGGCAGTGGTAAAACTGCACTAGCAGCTACTGTTGGTATTGACAGCGATTTCCCATATGTCAAGATAGTTTCAGCTGAAACAATGATTGGTCTACATGAGAGCACCAAATGTGCACAGATTATTAAGGTTTTTGAGGATGCATACAGGTCACCCTTGAGTGTCATAGTTCTTGATGACATTGAGAGATTATTAGAGTATGTGGCCATTGGTCCTCGTTTTTCAAACTTGATTTCTCAGACACTACTGGTTCTGCTCAAACGGCTTCCTCCAAAGGGGAAAAAACTCATGGTTGTTGGCACAACAAGTGAACTGGATTTCTTAGACTCAATTGGATTTTGTGATACCTTCTCTGTTACTTACCACGTTCCTACTTTGAACACAAAGGATGCAAAGAAGGTCCTTGAACAGTTGAATGTGTTCTCTGATGAAGATATTGATTCTGCTGCAGAGGCATTGAATGATATGCCTATCAGGAAGCTATACATGTTGATTGAAATGGCAGCGCAAGGGGAGCAAGGTGGATCTGCAGAGGCCATCTATTCTGGCAAAGAGAAGATTAATATCTCTCATTTCTATGATTGCCTTCAGGATGTTGTTAGATTATAA 2217 0.4231 MASLFGSSSSAPFKMRVTNTPSSDLVLTNLAFCSPSDLRNFAVPGNDQIGLNSIQRRCAKVSSGDSVQLTRFVPPDDFNLALLTIELEFVKKGNKSEQIDAVLLAKQLRKRFLNQVMTVGQKVLFEYHGNNYSFTVSQAAVEGQQKSNSLERGLISDDTYIIVNQREGATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTRGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELEGYMVTTGMMESRVEALEKTLVTRFHLPVAARTKNYSGAELEGVVKSAVSYALNRQLSLDDLTKQVDEENIKVTMDDFLNALHEVIPAFGASTDDLERCRLHGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGSRGSGKTALAATVGIDSDFPYVKIVSAETMIGLHESTKCAQIIKVFEDAYRSPLSVIVLDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLMVVGTTSELDFLDSIGFCDTFSVTYHVPTLNTKDAKKVLEQLNVFSDEDIDSAAEALNDMPIRKLYMLIEMAAQGEQGGSAEAIYSGKEKINISHFYDCLQDVVRL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03430 738 CDD RecA-like_NSF-SEC18_r1-like 185 361 - -
Phac2g03430 738 Gene3D - 489 660 IPR027417 -
Phac2g03430 738 SUPERFAMILY Cdc48 domain 2-like 75 176 IPR029067 -
Phac2g03430 738 SUPERFAMILY ADC-like 12 72 IPR009010 -
Phac2g03430 738 Pfam Cell division protein 48 (CDC48), domain 2 98 143 IPR004201 -
Phac2g03430 738 Gene3D - 76 172 - -
Phac2g03430 738 FunFam vesicle-fusing ATPase isoform X1 489 660 - -
Phac2g03430 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 490 IPR027417 -
Phac2g03430 738 PANTHER VESICULAR-FUSION PROTEIN NSF 13 737 IPR039812 GO:0016887|GO:0035494
Phac2g03430 738 SMART AAA_5 218 365 IPR003593 GO:0016887
Phac2g03430 738 SMART AAA_5 527 665 IPR003593 GO:0016887
Phac2g03430 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 707 IPR027417 -
Phac2g03430 738 FunFam Vesicle-fusing ATPase 76 173 - -
Phac2g03430 738 Gene3D - 173 364 IPR027417 -
Phac2g03430 738 Pfam AAA+ lid domain 424 473 IPR041569 -
Phac2g03430 738 FunFam Vesicular-fusion ATPase SEC18 174 364 - -
Phac2g03430 738 ProSitePatterns AAA-protein family signature. 333 351 IPR003960 GO:0005524|GO:0016887
Phac2g03430 738 Pfam ATPase family associated with various cellular activities (AAA) 222 362 IPR003959 GO:0005524|GO:0016887
Phac2g03430 738 Pfam ATPase family associated with various cellular activities (AAA) 532 646 IPR003959 GO:0005524|GO:0016887
Phac2g03430 738 FunFam Vesicle-fusing ATPase 364 480 - -
Phac2g03430 738 Gene3D - 365 478 - -
Phac2g03430 738 SMART CDC48_2_2 98 161 IPR004201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03430 Phac-Chr2 35662996 35676524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03430 186 600 Calmodulin-binding Proteins AT3G56690 25.370 3.85e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03430 K06027 - gmx:100779259 1259.97