Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03429 ATGAACCTGTTTAGGCAATACAAATCAATAGGTAATCATAGAGTTGGACTTGTACACAAGAACAACTTTGGTTTAAGCATGGTTCATAAGAATGTGTTAGAGCTGAACCTTGGTTTAGGCCACAACAACTTTGGTGGTGATGCACATGCAGGACAGTCACCAAGGCAGAGGTGCCCACCACCATTTCTGTTGAAGACCTATGATTTGTTGGAAGAAGGTGAAGCTGAAGCTGAAGCTGAAGATATCACCAAAATTGTGTCTTGGAATGCAGAAGGAACTTCCTTTGTTGTGTGGTCTCCTGCTGAATTCTCTGAGCTCACCTTGCCTAGATATTTCAAGCACAACAACTTCTCTAGCTTCATTCGCCAATTGAACACATATGGATTTAAGAAAATGTCTTCGAAAAGATGGGAATTCAAGCACGAGAAATTTCAGAGGGGTTGCAGGCATATGCTAGGTGAAATCACAAGGAAAAAGTGCGAGCCAAGTGTTTTTCCTGCATACCTCAAGTCTTCTTCTGAGGAAAATGCAACGAGTTCTACGGAAGAAAACAATCAGCAACTACTTATGGAGGAGAACAAGAACCTTAAGAAGGAGAGATTAGAGCTTCAAATGCAGATTGATGAATGCAAAGCACTTGAAATGAAGTTGTTGGCATGCCTCTCTCAGTTTATGGATACCCACCAAACTAAAGTTAGGAGACTCTGTTAA 711 0.4121 MNLFRQYKSIGNHRVGLVHKNNFGLSMVHKNVLELNLGLGHNNFGGDAHAGQSPRQRCPPPFLLKTYDLLEEGEAEAEAEDITKIVSWNAEGTSFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKMSSKRWEFKHEKFQRGCRHMLGEITRKKCEPSVFPAYLKSSSEENATSSTEENNQQLLMEENKNLKKERLELQMQIDECKALEMKLLACLSQFMDTHQTKVRRLC* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03429 236 ProSitePatterns HSF-type DNA-binding domain signature. 108 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 Pfam HSF-type DNA-binding 62 158 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 SMART hsfneu3 58 158 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 SUPERFAMILY "Winged helix" DNA-binding domain 59 158 IPR036390 -
Phac2g03429 236 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 56 209 IPR027725 -
Phac2g03429 236 FunFam Heat stress transcription factor A-6b 55 159 - -
Phac2g03429 236 PRINTS Heat shock factor (HSF) domain signature 69 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 PRINTS Heat shock factor (HSF) domain signature 107 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 PRINTS Heat shock factor (HSF) domain signature 120 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g03429 236 Gene3D - 54 159 IPR036388 -
Phac2g03429 236 Coils Coil 179 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03429 Phac-Chr2 35656101 35657956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03429 50 230 HSF AT5G62020 34.272 1.27e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac2g03429 HSF_DNA-bind 7.1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03429 K09419 - gmx:100789792 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03429 2 35656101 35657956 Phac2g03429 2 35656101 35657956 ECH