Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03412 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGGAGCCCTTCTCATACTCCTAATGAGATTGATGGCTTTCCACTTGATAATGTTAAGAATTTCTCTGATAAAGACCTGAGACTGGCTACTGATAACTATCATCCAAGCAAAAAGCTAGGACGAGGAGGTTTTGGAACTGTTTACCAGGGAACCTTAAAAGATGGAAGACAGGTAGCAGTGAAGACGCTTTCAGCAGGGTCAAAGCAGGGAGTTCGTGAATTTTTATCTGAAATTAAAACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGGTTGGTTGCTGCGTTCAAGAAACCAATCGCATATTAGTTTATGAATATGTACAAAATAACAGCCTCGATCGTGCATTACTTGGTGCTAGAGGTTCAAATATCATATTAGACTGGAGAAAAAGATCTGGTATTTGCATGGGTACTGCTAGAGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATTGTGCATAGAGACATCAAGGCAAGCAACATACTACTTGACAGACATTTCAATCCTAAAATAGGAGATTTCGGGTTGGCTAAATTATTTCCAGATGACATTACTCACATTAGCACAAGGATTGCTGGAACAACTGGTTACTTAGCACCAGAATATGCAATGGGTGGCCAGTTAACCCTGAAGGCTGATGTATATAGTTTTGGGGTTCTTATTCTTGAAATAATCAGTGGTAAAAGCAGTGCCAGGACAAACTGGGGAGGGTCCAACAAATATCTCTTGGAATGGGCCTGGCAACTGTACGAAGAAGGGAAACTGTTGGAGCTTGTGGATCCAGACATGGTTGAATTCCCTGAGGAAGAGGTAATTAGGTACGCGAAGGTTGCTTTTTTCTGCACACAAGCTGCAGCAAGTAGAAGGCCAATGATGTCCCAAGTGGTGGATATGCTGTCCAAGAACACGAGGCTGAATGAAAAGCAACTAACAGCACCAGGGTTTTTCCAGGATTCAGGAGCATCTTCTCAAAAGAAGTCATCCTTTGAATCCACAAGCTATCAATTTAGCTCTAACCCTTCCAGTATTACTCAGTTGGCCCCACGGTGA 1104 0.4203 MSCGCFGASTLKKKRSPSHTPNEIDGFPLDNVKNFSDKDLRLATDNYHPSKKLGRGGFGTVYQGTLKDGRQVAVKTLSAGSKQGVREFLSEIKTISNVKHPNLVELVGCCVQETNRILVYEYVQNNSLDRALLGARGSNIILDWRKRSGICMGTARGLAFLHEELVPHIVHRDIKASNILLDRHFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTLKADVYSFGVLILEIISGKSSARTNWGGSNKYLLEWAWQLYEEGKLLELVDPDMVEFPEEEVIRYAKVAFFCTQAAASRRPMMSQVVDMLSKNTRLNEKQLTAPGFFQDSGASSQKKSSFESTSYQFSSNPSSITQLAPR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03412 367 CDD STKc_IRAK 53 319 - -
Phac2g03412 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03412 367 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 350 - -
Phac2g03412 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Phac2g03412 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phac2g03412 367 PIRSF TyrPK_CSF1-R 140 259 - -
Phac2g03412 367 PIRSF TyrPK_CSF1-R 37 128 - -
Phac2g03412 367 PIRSF TyrPK_CSF1-R 272 364 - -
Phac2g03412 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03412 367 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Phac2g03412 367 Gene3D Transferase(Phosphotransferase) domain 1 123 335 - -
Phac2g03412 367 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Phac2g03412 367 SUPERFAMILY Protein kinase-like (PK-like) 31 352 IPR011009 -
Phac2g03412 367 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Phac2g03412 367 FunFam cold-responsive protein kinase 1 18 122 - -
Phac2g03412 367 MobiDBLite consensus disorder prediction 332 367 - -
Phac2g03412 367 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03412 Phac-Chr2 35548720 35553777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03412 10 366 Receptor kinase-like Gene Family AT1G56120 49.025 1.22e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac2g03412 PK_Tyr_Ser-Thr 9.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03412 - - gmx:100775344 684.871