Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03393 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTGTTGGAGGCTCAAGACTTGGAACTCCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAAACTCAGCCCTCAGAGTCTTTGAAGTGCCCAAGATGTGACTCTACCAACACCAAGTTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGCGGAACTCTACGAAATGTTCCAGTAGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAAACAAACACTCCAACACCATCTTCCACCACTGCCACCACCACCCCGACCACAGCCACCCCTTCTACTTGCACTACCACAGTCACAAACTCAATTGGCAACATGGATGCTATGCTGGGTAGTAGCCACCTGACAATTCATACTCCTCTTGCAGATGATCAGAAAAACATGGCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGATGAACGCGAGAGACTTAGACGGCAAAGATTTTGGTATTGGTATTGGTAATAATGGTATCTTCCCGAGTTCAACTTTGCCTCTCACTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAACCTCGAGCAGTTCTTTTGACACCAACCCTTGTTCGGTGTCAACCTCTCTGAGATCATCCAACGTTTATAACTATGGGGAGGAGTTTAAAGCAGTGGAGGAACCAACCATCAACAGTACTGCTATTGTGCCTAGCACAGGTGGCACTAACACACAGCCATGGGAAATAGCAGCAACAGGTGGTCTTGGCTTGGGAACTTCAAACTATTGGAACTGGGAGGACTTTGATTCATTGGTCTCTACTGATCTAAAAGATCCTTGGGATGATTCTGACATCAAACCCTGA 942 0.4639 MGLSSKQVSSSGLDWKQTLLEAQDLELPKPNLMRKQQQQQTQPSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKTNTPTPSSTTATTTPTTATPSTCTTTVTNSIGNMDAMLGSSHLTIHTPLADDQKNMASSLYQALIRPPPLLLQQNLMNARDLDGKDFGIGIGNNGIFPSSTLPLTHQSQSLLFPFSTSSSSFDTNPCSVSTSLRSSNVYNYGEEFKAVEEPTINSTAIVPSTGGTNTQPWEIAATGGLGLGTSNYWNWEDFDSLVSTDLKDPWDDSDIKP* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03393 313 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Phac2g03393 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 204 IPR045174 GO:0003700|GO:0006355
Phac2g03393 313 MobiDBLite consensus disorder prediction 88 125 - -
Phac2g03393 313 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Phac2g03393 313 MobiDBLite consensus disorder prediction 104 125 - -
Phac2g03393 313 Pfam Dof domain, zinc finger 46 99 IPR003851 GO:0003677|GO:0006355
Phac2g03393 313 MobiDBLite consensus disorder prediction 32 48 - -
Phac2g03393 313 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03393 Phac-Chr2 35444381 35446711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03393 33 117 C2C2-Dof Transcription Factor Family AT5G60850 63.953 1.52e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g03393 zf-Dof 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03393 - - gmx:100818111 454.136