Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03352 ATGGATTCCAATCACATAAGTCCATTGGAATTAGTGAAAGCCAATGAGATGGCTTGTCCTATAACCAATAGCTCAACTTCTCTGGACACTATCTCTCAAGGAATCTTGGGGAATCATAACTATCTCTTAAAGATTTGCCAAGAGACCAAAAAGATTGGAAGACGTTCCAAAATTTATCAACCTCAAGACCACATCATAGCTGAAAGGAAGCGAAGAGAGAAGCTCAGCCAGCGGTTCATTGCTTTATCTGCCCTTGTTCCTGGACTACAGAAGACGGACAAAGCTTCTATTCTTGGAGATGCTATCAACTACTTGAAGTAA 321 0.4081 MDSNHISPLELVKANEMACPITNSSTSLDTISQGILGNHNYLLKICQETKKIGRRSKIYQPQDHIIAERKRREKLSQRFIALSALVPGLQKTDKASILGDAINYLK* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03352 106 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 106 IPR011598 GO:0046983
Phac2g03352 106 Pfam Helix-loop-helix DNA-binding domain 62 106 IPR011598 GO:0046983
Phac2g03352 106 Gene3D - 47 106 IPR036638 GO:0046983
Phac2g03352 106 SMART finulus 65 106 IPR011598 GO:0046983
Phac2g03352 106 PANTHER BHLH TRANSCRIPTION FACTOR 17 106 - -
Phac2g03352 106 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 106 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03352 Phac-Chr2 35124132 35131804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03352 62 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 80.000 4.19e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g03352 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03352 - - vun:114179595 189.889