Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03331 ATGGGTGATGGAGAAGAATTCGCCGGAGCTTCGGGTCTGCGGCGAGCGGTAGAGCTCATCCTTGCCGTGCTCTCTCTCTCGCATTCGATTCGTGTCTTCGCCGGAAAATGGCAACTCATTCGCAACAAGCTGGAGGAGCTTCATGGCGGTTTAGTCGCCGCCGAAAACTGCGACTCCGGCGAGAGCCCGTCGCTTTCGCGGCTGGTGACGGCGGTGGCGGCCACTGCGACGGAGTGCCACGATCTGTGTCGGCGCTGCGTGGATGTTTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGATGCGCACGCGAGGAAGCTGTCTGAGATATACAAAAGGGGGATTTTATCAAATGGGTTTGCGCTCGTCGTGTCAAAGCCGAGTCTTGGCGCTTCGAAAGAGGACATGAGGTTCTACGTGAGGGACTTGACGACGAGGATGAAGGTTGGAGATTTGGGGATGAAACGACAGGCGTTGCGGAACCTTCTAGAAGTTGTGTTGGAGGATGAGAAATATGTGAAGGTGATTGTTGACGTGGCTGAAGTGGTTCATTTGTTGGTGGGGTTTTTGGGTTCTATCGAGGTGGAAATCCAGGAGGAGAGCACTAAGGTGGTTTCTGTGGTTGCTGGGTTTGATTCTTACAAAGGGGTTTTGGTTGGGGCGGGGGTGATTGCTCCTTTGATTAAGGTTCTGGATTGTGGGAGTGATTTGGGGAAGGTTGCGGCTGCGAGGTGTTTGGTGAAGTTGACTGAAAATTCGGACAATGCTTGGTGTGTTTCGGCTCATGGGGGTGTCAGTGTGTTGTTGAAGATTTGTGGTGGTGCTGATTGTGGAGGTGATTTGGTCGCACCAACTTGTGGGGTGTTGAGGAATCTCGTTGGTGTTGAGGAAATTAAGAGGTTTATGATTGATGAGGGTGCTGTGTTAACTTTCATTAAGCTTGTGAGGTCCAAGGAGGAAGCGATTCAGGTGAATTCGATTGGATTTATTTTGACTATTGCCTCTGGGGATGAGTTGGTTAGGCAGATGGTGATCAGAGAGGGAGGGATTCGTGCTTTGTTGCGTATTTTGGATCCTAAGTGGTCTTATTCTTGTAAAACCAGGGAGGTAGCAATGAGGGCCGTTGAGGATTTGTGTTTTTGTTCACCTAGTTCCGTGGGTGTTTTGATGAGTTACGGCTTTGTAGATCAGCTGACATACTATATTCGAAATGGGGAGGTTTCGATTCAGGAGTTGGCATTAAAAGTGGCGTTTAGGTTGTGTGGAACATCTGAGGAGGCTAAGAAAGCAATGGGGGACGCAGGGTTTATGCCAGAGTTTGTTAAGTTTCTGAATGCAAAGTCCTTTGAGGTTCGAGAAATGGCAGCTGAGGCACTCTCTGGCATGGTTATGGTGCCTAGAAATAGAAAGAGATTCGTGCAGGATGACCATAATATTGCCCTTCTTCTGCAGTTGCTTGATCCAGAGGAGGGGAATTCTGGTAATAAAAAGTTCTTAATATCTATATTAATGTCCTTAACAAGTTGCACTAGTGGGAGGAAAAAGATTGTTAGTTCCGGATATGCCAAAAACATAGAAAAACTTGCGGACGCTGAAGTTTCTTCTGACGCAAAGAGACTTGTCAAGAAGCTATCCACTAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1704 0.4865 MGDGEEFAGASGLRRAVELILAVLSLSHSIRVFAGKWQLIRNKLEELHGGLVAAENCDSGESPSLSRLVTAVAATATECHDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHARKLSEIYKRGILSNGFALVVSKPSLGASKEDMRFYVRDLTTRMKVGDLGMKRQALRNLLEVVLEDEKYVKVIVDVAEVVHLLVGFLGSIEVEIQEESTKVVSVVAGFDSYKGVLVGAGVIAPLIKVLDCGSDLGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGGADCGGDLVAPTCGVLRNLVGVEEIKRFMIDEGAVLTFIKLVRSKEEAIQVNSIGFILTIASGDELVRQMVIREGGIRALLRILDPKWSYSCKTREVAMRAVEDLCFCSPSSVGVLMSYGFVDQLTYYIRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCTSGRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSMLSGIWHS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03331 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 566 - -
Phac2g03331 567 SMART arm_5 177 218 IPR000225 GO:0005515
Phac2g03331 567 SMART arm_5 432 472 IPR000225 GO:0005515
Phac2g03331 567 SMART arm_5 345 388 IPR000225 GO:0005515
Phac2g03331 567 SMART arm_5 219 259 IPR000225 GO:0005515
Phac2g03331 567 SMART arm_5 260 302 IPR000225 GO:0005515
Phac2g03331 567 SMART arm_5 303 343 IPR000225 GO:0005515
Phac2g03331 567 Gene3D - 147 556 IPR011989 -
Phac2g03331 567 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
Phac2g03331 567 SUPERFAMILY ARM repeat 154 547 IPR016024 -
Phac2g03331 567 Pfam Armadillo/beta-catenin-like repeat 433 468 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03331 Phac-Chr2 34903509 34906267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03331 131 380 U-box Gene Family AT2G23140 21.724 6.06e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03331 - - gmx:100809382 1026.54