Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03327 ATGGGTAGATCACCTTGTTGTGACAAAAATGGCCTCAAGAAAGGACCCTGGACAACAGAAGAAGACCAGAAACTTGTTGATTACATTCAGAAACATGGCTACGGCAATTGGAGAGTACTCCCAAAGAATGCTGGGTTGCAAAGGTGTGGAAAGAGTTGTCGACTCCGATGGACAAACTATCTTCGGCCAGATATAAAGCGTGGTCGATTCACTTTTGAAGAGGAAGAGACCATAATACAACTACATAGCATTCTTGGTAACAAGTGGTCAGCTATTGCTTCTCGTTTGCCTGGAAGAACAGACAATGAAATCAAGAATTACTGGAATACACACATTAGAAAAAGGCTTCTAAGGATGGGAATTGACCCCGTGACACATAGGCCAAGGCTTGATCTTTTGGACCTCTCTTCCATCCTAAGTTCATCCCTTTATGGTCCAACACAGATGAACATCCAAAGACTGTTTGGTACACAGACAATGGTGAACCCTGAACTCTTAAAGCTTGCTTCATCGCTCTTTTCTTCTCAGCAACGTGAAAACCTCAACATGTGCGCACAAAATTGTGATCCCCAAATTAACCAAATCCCACACCTGGTACAAACTCAGGACTTTGCTGAAGAACCATGTAAAACACTAGACAATACAATGAATCCTCCTTGTTCTTCATTGTCATGGCCTTTTGCTCAAGAAGAGTTGGTTGAATGCAATATGAACCCGTACCCTTCTGTTTTCTATGACTCTTGCTTCCAACAACATTCTCAACCAAGTGATTTGCAATGCAACGGAATTGATACAAGCTATGTTGCTCAATTACCAAGCTATAACTACCATGGCTCTGATTATGACGCAAATCTTATGGACCCTCCAATGTCTGAATCCTCAACCTATAACCATTCCCATAACAGCAATCAGAACTTCAGCTTCGCTTCAGTTATCTCAACGCCTTCATCAAGCCCCACGCCGTTGAATTCGAACTCAACGAATGTCAATGGAAGTAGCAGCACTGAGGATGAGATAGAAAGCTATGTCAGCAGCAACTTGTTGAGATTTGAAATCCCAAACATGTTAGGTGTGAATGAGTTCCTATAA 1089 0.4215 MGRSPCCDKNGLKKGPWTTEEDQKLVDYIQKHGYGNWRVLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFTFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHRPRLDLLDLSSILSSSLYGPTQMNIQRLFGTQTMVNPELLKLASSLFSSQQRENLNMCAQNCDPQINQIPHLVQTQDFAEEPCKTLDNTMNPPCSSLSWPFAQEELVECNMNPYPSVFYDSCFQQHSQPSDLQCNGIDTSYVAQLPSYNYHGSDYDANLMDPPMSESSTYNHSHNSNQNFSFASVISTPSSSPTPLNSNSTNVNGSSSTEDEIESYVSSNLLRFEIPNMLGVNEFL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03327 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac2g03327 362 CDD SANT 69 112 IPR001005 -
Phac2g03327 362 CDD SANT 16 61 IPR001005 -
Phac2g03327 362 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac2g03327 362 Gene3D - 69 116 - -
Phac2g03327 362 SMART sant 66 114 IPR001005 -
Phac2g03327 362 SMART sant 13 63 IPR001005 -
Phac2g03327 362 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac2g03327 362 MobiDBLite consensus disorder prediction 310 337 - -
Phac2g03327 362 FunFam Transcription factor MYB39 69 130 - -
Phac2g03327 362 FunFam MYB-related transcription factor 13 66 - -
Phac2g03327 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac2g03327 362 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 291 - -
Phac2g03327 362 Gene3D - 13 66 - -
Phac2g03327 362 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac2g03327 362 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac2g03327 362 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03327 Phac-Chr2 34816020 34817775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03327 1 362 MYB Transcription Factor Family AT4G21440 55.585 4.11e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g03327 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03327 K09422 - gmx:100808310 488.419