Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03325 ATGACGAAAAAGCCTAAGGCGGATGGAGCGGAGGATCCTTTGCCGGACCACCTCCGGTGCGGGCGCACCGACGGCCGGCAATGGCGGTGCCGGCGGCGAGTGAAGGACAATCTGAAGCTTTGTGAGATTCACTACCTCCAAGGTCGCCATCGGCAGTACAAGGAGAAGGTTCCGGAGTCCTTGAAGCTTCAGCGGAAGCGCAAGACAAACGAGGAGGAGCCTAATGCTGTGGACAATGTCGAATCTAGGGCACGGAGAACCTCGAGAATCGTGAAGAAGAAGCGCAGGCTTTTTGAGGGTTCGGAAGCGCTGGTGGTGGCGGCTCCCTCTCCCGCGAAGAAGAAGGCGCTGAAGCAGGGCGATATGCAGTTGGAGCTTATAAGGATGGTTCTCAAGAGAGAGGCGGAGAAGAAGAACAAAAACAACAAGAGCAAGAAGAAGAATAAGAAGAAGAACAAGAAGAAGAAGAAAAAAGAGGAGGAAGAGGAATTGTGTTACGGTGAAGGGGAACTGAGGAGGGAATTGCCAAATGGTGTGATGGAAATCTCTCCGGCTTCGCCGACCCGTGATTACGACAATGTGGCTTCGCATTTTGACGTGAAAGTTGGTGTTGATTCTAAAACTGCTACTCCACGTTACTTTAGGTCCAAGAATGTTGATAGAGTCCCGGTGGGGAAGTTGCAGATTGTGCCGTATGGATCGAACTTGAAGAAGGGTACCAAGGGTAAGAGGAAGAGGTGTCATTGGTGCCAGAGAAGCGACTCTTGCAATCTCATCCAGTGCTTGAGCTGTGAGAGGGAGTTTTTCTGCATGGATTGCATTAAAGAGCGGTATTTGGACACTCAAAATGAAGTTAAGAAGGCATGCCCAGTTTGTCGTGGAACTTGCAGTTGTAAGGATTGCTCAGCAAGTCAATGTAAAGACAGTGAAAGTAAGGAATATTTGACCGGTAAGAGCAGAGTTGATAGAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCATATAAGTGAAGATCAGAATATGGAGCTAGAAACAGAAGCAAAAGTTAAAGGAAAGAATATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGCTGCAATGAGAAAAATTATTGCAACCACTGCAAGACACCCATTTTGGATCTCCATAGAAGCTGTCCGAGCTGTTCGTATAGCCTATGCTCAAGTTGTTGTCAGGAATTAAGTCAAGGAAAAGCTTCTGGAGAAATTAACTTATCTACTTTCAATCGACCTGATAAAATGAAAACTAGCAGTGCTAGTGAGAGCCAAACTTTGGACGAGAAGGCCATATCTAGTGGCAATTTAACTGATACTTCAGTATTGCCAGAGTGGGCAAATTGTAATGGCATTGATAGTCTATCATGCCCTCCTACAGAGCTTGGTGGTTGTGGTAATAGCCACCTTGAGTTGAGATCTGTTTTCCCCTCCAATTGGATCAAAGAGATGGAAGTAAAGGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAGTTCAAGCTGCTCATTGTGTTTTGACACCGATCACAATACTAACAGGTACAAGCAGTTGCAAGAAGCAGCTCTAAGAGAAGATTCCAATGATAATTACTTGTTTTGTCCGACAGTGTTGGACATCACTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGTCATCCTATAGTGGTCCAAGATGTGCTCCAAAGAACGTCAAACCTCAGCTGGGATCCACTGATCATGTTCTGTACTTATCTTGAGCAGAATATTGCGAGATATGAGAATAATAAAAACGCACTTGAATCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGGCAGTACTTTACTGGGTCTGTAAAACGCCGTCCTCAAAGAAATACTTGGCATGAGATGCTCAAACTAAAGGGGTTGCTTTCTTCCCAAATATTCAAAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCAGTTCCAGAATACATGCATCCCTGGTCAGGCCTTCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCTAAACATGACATTGGACCATATCTCTATATTTCTTATGGCTCTGCTGACAAAGAAACTGATTCTGTCACAACACTCTGCTATGATCCATATGATGTGGTTAATATTATGACACATACCACAGATGCCCCCCTCTCTACAGAACAACTTACAAAAATAAGAAAATTACTGAAAAAGCACAAAACTCTGTGTCAAATGAAGACTATTGCTACTGAGGAGCCACAGGAACAAAAAGTTAATGGAATGCAATTATTGCATGTTGAAGAAACGGAGCAAAGAGGCTTGCAGAGTATTGTTGAAGAAGGAATGAACTTTTTCAGGAGAGTCAATAGAACGTCTTGCATCTCAACTGAAGTTAAAAGAGTTTCTAGTCAGAGCATGGACAGCAATATTTCCCAGAATGGAGAATGTGATTTCTTTACTGAATCTGATTCCGGACGCACTTTACTTCTCCTTGGGACTGTTCAAACCACTGAAATCTCTAAACAGGATATTCCTAGAAAACCCTTTGAAAGCTCAAAAAGCCGTAAAAATAAGTTTACTGAGCATTTGGGCGCCCAGTGGGATGTCTTTCGCAGACAAGATGTACCAAAGCTTATAGAATACCTTAAACGACACTATGATGAATTTTCTTATACACGTGACTATCACAAGAAGATGGTTCACCCAATTCTAGATCAGAACATTTTTCTTGATAATACTCACAAAATGAGACTAAAGGAGGAATTTAAGATTGAACCATGGTCTTTTCAGCAACACGTTGGACAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATCAGGAATTCTAAGGTGTGGATTAGTGTAAAATTCACTTTCTTGCTAGCCTGA 2940 0.4276 MTKKPKADGAEDPLPDHLRCGRTDGRQWRCRRRVKDNLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKTNEEEPNAVDNVESRARRTSRIVKKKRRLFEGSEALVVAAPSPAKKKALKQGDMQLELIRMVLKREAEKKNKNNKSKKKNKKKNKKKKKKEEEEELCYGEGELRRELPNGVMEISPASPTRDYDNVASHFDVKVGVDSKTATPRYFRSKNVDRVPVGKLQIVPYGSNLKKGTKGKRKRCHWCQRSDSCNLIQCLSCEREFFCMDCIKERYLDTQNEVKKACPVCRGTCSCKDCSASQCKDSESKEYLTGKSRVDRILHFHYLICMLLPVLKHISEDQNMELETEAKVKGKNISDIQIKQVEFGCNEKNYCNHCKTPILDLHRSCPSCSYSLCSSCCQELSQGKASGEINLSTFNRPDKMKTSSASESQTLDEKAISSGNLTDTSVLPEWANCNGIDSLSCPPTELGGCGNSHLELRSVFPSNWIKEMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDHNTNRYKQLQEAALREDSNDNYLFCPTVLDITGDNFEHFQKHWGKGHPIVVQDVLQRTSNLSWDPLIMFCTYLEQNIARYENNKNALESCLDWWEVEINIRQYFTGSVKRRPQRNTWHEMLKLKGLLSSQIFKEQFPAHFAEVIDALPVPEYMHPWSGLLNLAANLPHGSAKHDIGPYLYISYGSADKETDSVTTLCYDPYDVVNIMTHTTDAPLSTEQLTKIRKLLKKHKTLCQMKTIATEEPQEQKVNGMQLLHVEETEQRGLQSIVEEGMNFFRRVNRTSCISTEVKRVSSQSMDSNISQNGECDFFTESDSGRTLLLLGTVQTTEISKQDIPRKPFESSKSRKNKFTEHLGAQWDVFRRQDVPKLIEYLKRHYDEFSYTRDYHKKMVHPILDQNIFLDNTHKMRLKEEFKIEPWSFQQHVGQAVIIPAGCPYQIRNSKVWISVKFTFLLA* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03325 979 SMART cupin_9 661 979 IPR003347 -
Phac2g03325 979 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 976 IPR045109 GO:0032454|GO:0033169
Phac2g03325 979 MobiDBLite consensus disorder prediction 1 22 - -
Phac2g03325 979 MobiDBLite consensus disorder prediction 56 84 - -
Phac2g03325 979 Gene3D Cupin 540 979 - -
Phac2g03325 979 ProSiteProfiles JmjC domain profile. 680 979 IPR003347 -
Phac2g03325 979 MobiDBLite consensus disorder prediction 139 154 - -
Phac2g03325 979 ProSiteProfiles Zinc finger RING-type profile. 247 293 IPR001841 -
Phac2g03325 979 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
Phac2g03325 979 Pfam WRC 15 56 IPR014977 -
Phac2g03325 979 SUPERFAMILY Clavaminate synthase-like 560 974 - -
Phac2g03325 979 MobiDBLite consensus disorder prediction 133 162 - -
Phac2g03325 979 Coils Coil 128 164 - -
Phac2g03325 979 Pfam JmjC domain, hydroxylase 879 976 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03325 Phac-Chr2 34796323 34802531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03325 7 104 GRF Transcription Factor Family AT4G37740 36.538 1.43e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac2g03325 JmjC 1.2e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03325 K15601 - gmx:100810673 1618.21