Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03323 ATGACGAAAAAGCCTAAGGCGGATGGAGCGGAGGATCCTTTGCCGGACCACCTCCGGTGCGGGCGCACCGACGGCCGGCAATGGCGGTGCCGGCGGCGAGTGAAGGACAATCTGAAGCTTTGTGAGATTCACTACCTCCAAGGTCGCCATCGGCAGTACAAGGAGAAGGTTCCGGAGTCCTTGAAGCTTCAGCGGAAGCGCAAGACAAACGAGGAGGAGCCTAATGCTGTGGACAATGTCGAATCTAGGGCACGGAGAACCTCGAGAATCGTGAAGAAGAAGCGCAGGCTTTTTGAGGGTTCGGAAGCGCTGGTGGTGGCGGCTCCCTCTCCCGCGAAGAAGAAGGCGCTGAAGCAGGGCGATATGCAGTTGGAGCTTATAAGGATGGTTCTCAAGAGAGAGGCGGAGAAGAAGAACAAAAACAACAAGAGCAAGAAGAAGAATAAGAAGAAGAACAAGAAGAAGAAGAAAAAAGAGGAGGAAGAGGAATTGTGTTACGGTGAAGGGGAACTGAGGAGGGAATTGCCAAATGGTGTGATGGAAATCTCTCCGGCTTCGCCGACCCGTGATTACGACAATGTGGCTTCGCATTTTGACGTGAAAGTTGGTGTTGATTCTAAAACTGCTACTCCACGTTACTTTAGGTCCAAGAATGTTGATAGAGTCCCGGTGGGGAAGTTGCAGATTGTGCCGTATGGATCGAACTTGAAGAAGGGTACCAAGGGTAAGAGGAAGAGGTGTCATTGGTGCCAGAGAAGCGACTCTTGCAATCTCATCCAGTGCTTGAGCTGTGAGAGGGAGTTTTTCTGCATGGATTGCATTAAAGAGCGGTATTTGGACACTCAAAATGAAGTTAAGAAGGCATGCCCAGTTTGTCGTGGAACTTGCAGTTGTAAGGATTGCTCAGCAAGTCAATGTAAAGACAGTGAAAGTAAGGAATATTTGACCGGTAAGAGCAGAGTTGATAGAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCATATAAGTGAAGATCAGAATATGGAGCTAGAAACAGAAGCAAAAGTTAAAGGAAAGAATATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGCTGCAATGAGAAAAATTATTGCAACCACTGCAAGACACCCATTTTGGATCTCCATAGAAGCTGTCCGAGCTGTTCGTATAGCCTATGCTCAAGTTGTTGTCAGGAATTAAGTCAAGGAAAAGCTTCTGGAGAAATTAACTTATCTACTTTCAATCGACCTGATAAAATGAAAACTAGCAGTGCTAGTGAGAGCCAAACTTTGGACGAGAAGGCCATATCTAGTGGCAATTTAACTGATACTTCAGTATTGCCAGAGTGGGCAAATTGTAATGGCATTGATAGTCTATCATGCCCTCCTACAGAGCTTGGTGGTTGTGGTAATAGCCACCTTGAGTTGAGATCTGTTTTCCCCTCCAATTGGATCAAAGAGATGGAAGTAAAGGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAGTTCAAGCTGCTCATTGTGTTTTGACACCGATCACAATACTAACAGGTACAAGCAGTTGCAAGAAGCAGCTCTAAGAGAAGATTCCAATGATAATTACTTGTTTTGTCCGACAGTGTTGGACATCACTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGTCATCCTATAGTGGTCCAAGATGTGCTCCAAAGAACGTCAAACCTCAGCTGGGATCCACTGATCATGTTCTGTACTTATCTTGAGCAGAATATTGCGAGATATGAGAATAATAAAAACGCACTTGAATCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGGCAGTACTTTACTGGGTCTGTAAAACGCCGTCCTCAAAGAAATACTTGGCATGAGATGCTCAAACTAAAGGGGTTGCTTTCTTCCCAAATATTCAAAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCAGTTCCAGAATACATGCATCCCTGGTCAGGCCTTCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCTAAACATGACATTGGACCATATCTCTATATTTCTTATGGCTCTGCTGACAAAGAAACTGATTCTGTCACAACACTCTGCTATGATCCATATGATGTGATATTATGA 2193 0.4419 MTKKPKADGAEDPLPDHLRCGRTDGRQWRCRRRVKDNLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKTNEEEPNAVDNVESRARRTSRIVKKKRRLFEGSEALVVAAPSPAKKKALKQGDMQLELIRMVLKREAEKKNKNNKSKKKNKKKNKKKKKKEEEEELCYGEGELRRELPNGVMEISPASPTRDYDNVASHFDVKVGVDSKTATPRYFRSKNVDRVPVGKLQIVPYGSNLKKGTKGKRKRCHWCQRSDSCNLIQCLSCEREFFCMDCIKERYLDTQNEVKKACPVCRGTCSCKDCSASQCKDSESKEYLTGKSRVDRILHFHYLICMLLPVLKHISEDQNMELETEAKVKGKNISDIQIKQVEFGCNEKNYCNHCKTPILDLHRSCPSCSYSLCSSCCQELSQGKASGEINLSTFNRPDKMKTSSASESQTLDEKAISSGNLTDTSVLPEWANCNGIDSLSCPPTELGGCGNSHLELRSVFPSNWIKEMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDHNTNRYKQLQEAALREDSNDNYLFCPTVLDITGDNFEHFQKHWGKGHPIVVQDVLQRTSNLSWDPLIMFCTYLEQNIARYENNKNALESCLDWWEVEINIRQYFTGSVKRRPQRNTWHEMLKLKGLLSSQIFKEQFPAHFAEVIDALPVPEYMHPWSGLLNLAANLPHGSAKHDIGPYLYISYGSADKETDSVTTLCYDPYDVIL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03323 730 ProSiteProfiles Zinc finger RING-type profile. 247 293 IPR001841 -
Phac2g03323 730 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
Phac2g03323 730 MobiDBLite consensus disorder prediction 1 22 - -
Phac2g03323 730 MobiDBLite consensus disorder prediction 133 162 - -
Phac2g03323 730 MobiDBLite consensus disorder prediction 56 84 - -
Phac2g03323 730 Pfam WRC 15 56 IPR014977 -
Phac2g03323 730 Coils Coil 128 164 - -
Phac2g03323 730 Gene3D Cupin 551 730 - -
Phac2g03323 730 MobiDBLite consensus disorder prediction 139 154 - -
Phac2g03323 730 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 729 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03323 Phac-Chr2 34796323 34802531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03323 7 104 GRF Transcription Factor Family AT4G37740 36.538 1.55e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03323 K15601 - gmx:100810673 1215.29