Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03312 ATGGCGACTCATCATCTTCCCGACCACTTCAAGTGTCCAATTTCCCTAGAAATAATGTCGGACCCCGTAATCCTCTCGTCGGGTCACACCTTCGACCGTTCCTCAATCCAACGTTGGCTAGACGCAGGCTACAGAACATGTCCAATTACCAAATTGCCCCTCCCCGACCAACCTTCCCTCATTCCCAACCACGCGCTCCGAAGCTTAATCTCCAACTACACCCTCCTACCCCCTCTCCACCAAACCATTTCCCAACCCCAAACCCTAATTTCCACCCTCACCTCTCCCTCTTCTTCCTCCGATTCCAAAATCGATTCCCTCCGCCACCTCACGCGCCTCTCCAAGCGCGACTGCGCCTTCCGCCGCCACCTCGCCGACTCCGCAGCCGTCCCCGCCGTCCTCGCCGCCGTCGTCGACCCCGCTCTCCAGGAGAAGGCGCTGCTGCTTCTCCTCAACCTCACCCTCGACGACGACTCCAAGGTCGGACTCGTCGCCGAGGGCGTCGTCGCGCGCCTCGTCGCCGTTCTCCTCAACGCGCCGCCTGACTGCCGCGCCGTGGCGGCCACCATCGTCACCAGCCTCTCTGTTGTCGAGGTCAACAGGGCCACCATCGGCGCTTTCCCGGCGGCGATCGCGGCGCTCGTGGCGATTCTCCGTGACGGCAAAGGGAGGGAGAGGAAGGAGGCCGCCACCGCGCTCTACGCGCTCTGTTCCTTTCCGGATAACCGGAGAAGAGCAGTGAATTGCGGCGCGGTGCCGATTCTGCTTCGGAACGTAGAAATTGGATTGGAACGGTGCGTTGAGGTAATTGGCGTTCTGGCGAAGTGTAAGGAAGGGAGAGAGCAAATGGAGGGTTATAACGGTTGTGTTCAGATTCTGGCTCGCGTTTTGAGGAACGGAAGCTCCAGGGGGGTTCAGTATGCGCTTTTCGCACTTACTTCGCTTTGCTTGTATAGCCAGCGAATGGTGCTGTTGGCTCAGGAAGAAGGTGTTCTGGAAGCTTCTATTGTATTCGTGGAAGATGATAATGAGAAAGTGAGGAGGAATGCGTGTAATTTGATTCGGGCTCTCCGTGGCAACAACAGCAACCACGATCGGGTGGAGTGA 1107 0.5818 MATHHLPDHFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGYRTCPITKLPLPDQPSLIPNHALRSLISNYTLLPPLHQTISQPQTLISTLTSPSSSSDSKIDSLRHLTRLSKRDCAFRRHLADSAAVPAVLAAVVDPALQEKALLLLLNLTLDDDSKVGLVAEGVVARLVAVLLNAPPDCRAVAATIVTSLSVVEVNRATIGAFPAAIAALVAILRDGKGRERKEAATALYALCSFPDNRRRAVNCGAVPILLRNVEIGLERCVEVIGVLAKCKEGREQMEGYNGCVQILARVLRNGSSRGVQYALFALTSLCLYSQRMVLLAQEEGVLEASIVFVEDDNEKVRRNACNLIRALRGNNSNHDRVE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03312 368 SUPERFAMILY RING/U-box 5 74 - -
Phac2g03312 368 Gene3D - 86 368 IPR011989 -
Phac2g03312 368 FunFam RING-type E3 ubiquitin transferase 5 76 - -
Phac2g03312 368 SMART Ubox_2 9 73 IPR003613 GO:0004842|GO:0016567
Phac2g03312 368 Pfam U-box domain 7 73 IPR003613 GO:0004842|GO:0016567
Phac2g03312 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 75 IPR013083 -
Phac2g03312 368 ProSiteProfiles U-box domain profile. 5 80 IPR003613 GO:0004842|GO:0016567
Phac2g03312 368 SUPERFAMILY ARM repeat 87 357 IPR016024 -
Phac2g03312 368 PANTHER U BOX DOMAIN-CONTAINING 7 354 - -
Phac2g03312 368 FunFam RING-type E3 ubiquitin transferase 70 261 - -
Phac2g03312 368 CDD RING-Ubox_PUB 7 57 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03312 Phac-Chr2 34671437 34675927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03312 6 359 U-box Gene Family AT4G21350 58.082 1.81e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03312 - - gmx:100785141 538.88