Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03306 ATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGTGAAAACTGGTGGAGTAGTACTATTGATTCAGCAAGAACTGTCTTCCCTATAAGCTCATCATCGATTTCTTCTTCTCCTTGTTCCGTGGCAGCTAATAATGATGCAGGAATCTACAGCACTCGGCAAACAGATTTGAAGGCAACCAAGTGTTGTGTTGAAGAGACTAACAATTTTGTTTCTAACACTTACCTGGGTTTTGTTGATGCACAGAAGGCACCCAAGAGTGAATCAGCCAGTGGAAGTGGTGGCATGTTGATGGATTCCACCATACAGATGATGGGTTTTGGCCTCACATCTTCAACATCAGAGAATTGGAATCAGCCTCTTTTAGTTCGATGTAATGGAAGGGCAGAGAGCAATTTTCATTCCGTGCTTCAGGAAGAAACGGGAATAGATTCTTCTAATTCACAAATTCGCAGGGATTGGACCCCAAAGAGCTTCTCCTCTGGTGGTGGTGGAGGAGACCAAATTGATAATTTCAAGCCATTGAACCAAGAATTTTCCGGAGATTACCAGAGTCTAAGTCCTTTATCAAGCACTGGGTTATCGTCAAATCGTGATTTCGCAATGGGATCAGCCTCATATGGTAACCCTTCAACGTTACAAAGCTTATATGACCCTGATCCTCATCCACAATTACCACACCACTCACTTTTCACCAACCCTCCAATGTCCTATTCATCAAAGGCAACTTATGGGACACCCTGCACTGAACTAACGCCAACATGGTCTAAAGTCTCTACCTTTTTGAAGCCCACAACAATAGCAAAGCAACACCCTATTGGACTTCACTTTTCTAACAACACCCCTTTCTGGAATGCTTCCGCCGACGCAATTAACGACATAAGAGTAGGTACCTTTCCTTCTTCACAACCACAATACCAAACGCCAACCTTTGATCAAGAGAAACCCAATTGCCCAAGTACTATATTAATTAAGCTCAACAGTGAAGAAACTCTAGATTCAGCAACAATGACGAAGAAAGATGCTTGTGAACCAGCATTAAAGAGGCCAAGGATTGAAACTCCATCCCCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACCGCATCCGTTCTTCACGAAGCCATTGAGTACATTAAGTTCCTTCATGATCAAGTTAATGTATGTTTCCATTGA 1230 0.4325 MAEEFQARICGENWWSSTIDSARTVFPISSSSISSSPCSVAANNDAGIYSTRQTDLKATKCCVEETNNFVSNTYLGFVDAQKAPKSESASGSGGMLMDSTIQMMGFGLTSSTSENWNQPLLVRCNGRAESNFHSVLQEETGIDSSNSQIRRDWTPKSFSSGGGGGDQIDNFKPLNQEFSGDYQSLSPLSSTGLSSNRDFAMGSASYGNPSTLQSLYDPDPHPQLPHHSLFTNPPMSYSSKATYGTPCTELTPTWSKVSTFLKPTTIAKQHPIGLHFSNNTPFWNASADAINDIRVGTFPSSQPQYQTPTFDQEKPNCPSTILIKLNSEETLDSATMTKKDACEPALKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVCFH* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03306 409 Gene3D - 361 407 IPR036638 GO:0046983
Phac2g03306 409 CDD bHLH_AtbHLH_like 357 406 IPR045239 -
Phac2g03306 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 174 406 - -
Phac2g03306 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Phac2g03306 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 406 IPR036638 GO:0046983
Phac2g03306 409 MobiDBLite consensus disorder prediction 139 164 - -
Phac2g03306 409 MobiDBLite consensus disorder prediction 139 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03306 Phac-Chr2 34641891 34645678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03306 276 406 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 50.370 4.71e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03306 - - pvu:PHAVU_002G2196001 745.347