Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03305 ATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGTGAAAACTGGTGGAGTAGTACTATTGATTCAGCAAGAACTGTCTTCCCTATAAGCTCATCATCGATTTCTTCTTCTCCTTGTTCCGTGGCAGCTAATAATGATGCAGGAATCTACAGCACTCGGCAAACAGATTTGAAGGCAACCAAGTGTTGTGTTGAAGAGACTAACAATTTTGTTTCTAACACTTACCTGGGTTTTGTTGATGCACAGAAGGCACCCAAGAGTGAATCAGCCAGTGGAAGTGGTGGCATGTTGATGGATTCCACCATACAGATGATGGGTTTTGGCCTCACATCTTCAACATCAGAGAATTGGAATCAGCCTCTTTTAGTTCGATGTAATGGAAGGGCAGAGAGCAATTTTCATTCCGTGCTTCAGGAAGAAACGGGAATAGATTCTTCTAATTCACAAATTCGCAGGGATTGGACCCCAAAGAGCTTCTCCTCTGGTGGTGGTGGAGGAGACCAAATTGATAATTTCAAGCCATTGAACCAAGAATTTTCCGGAGATTACCAGAGTCTAAGTCCTTTATCAAGCACTGGGTTATCGTCAAATCGTGATTTCGCAATGGGATCAGCCTCATATGGTAACCCTTCAACGTTACAAAGCTTATATGACCCTGATCCTCATCCACAATTACCACACCACTCACTTTTCACCAACCCTCCAATGTCCTATTCATCAAAGGCAACTTATGGGACACCCTGCACTGAACTAACGCCAACATGGTCTAAAGTCTCTACCTTTTTGAAGCCCACAACAATAGCAAAGCAACACCCTATTGGACTTCACTTTTCTAACAACACCCCTTTCTGGAATGCTTCCGCCGACGCAATTAACGACATAAGAGTAGGTACCTTTCCTTCTTCACAACCACAATACCAAACGCCAACCTTTGATCAAGAGAAACCCAATTGCCCAAGTACTATATTAATTAAGCTCAACAGTGAAGAAACTCTAGATTCAGCAACAATGACGAAGAAAGATGCTTGTGAACCAGCATTAAAGAGGCCAAGGATTGAAACTCCATCCCCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACCGCATCCGTTCTTCACGAAGCCATTGAGTACATTAAGTTCCTTCATGATCAAGTTAATGTTTTGAGTACCTCATATATGAAAAATGGAGCTCCCATTCAACAGCAGCAGGGGTGTGATGATATGAAAGAGTCAGAAGGACCACAGGAAGATTTAAAAAGTCGAGGTCTGTGTTTGGTACCGATTTCAAGCACATTTCCAGTGGCAACAGAAACCACTAGTAGTGCTGAATTGTGGACGCCTACATTCAGGGGCGCACTCTTGAGGTAG 1425 0.4365 MAEEFQARICGENWWSSTIDSARTVFPISSSSISSSPCSVAANNDAGIYSTRQTDLKATKCCVEETNNFVSNTYLGFVDAQKAPKSESASGSGGMLMDSTIQMMGFGLTSSTSENWNQPLLVRCNGRAESNFHSVLQEETGIDSSNSQIRRDWTPKSFSSGGGGGDQIDNFKPLNQEFSGDYQSLSPLSSTGLSSNRDFAMGSASYGNPSTLQSLYDPDPHPQLPHHSLFTNPPMSYSSKATYGTPCTELTPTWSKVSTFLKPTTIAKQHPIGLHFSNNTPFWNASADAINDIRVGTFPSSQPQYQTPTFDQEKPNCPSTILIKLNSEETLDSATMTKKDACEPALKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGAPIQQQQGCDDMKESEGPQEDLKSRGLCLVPISSTFPVATETTSSAELWTPTFRGALLR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03305 474 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 418 IPR036638 GO:0046983
Phac2g03305 474 Gene3D - 361 425 IPR036638 GO:0046983
Phac2g03305 474 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Phac2g03305 474 CDD bHLH_AtbHLH_like 357 408 IPR045239 -
Phac2g03305 474 MobiDBLite consensus disorder prediction 139 164 - -
Phac2g03305 474 FunFam Transcription factor bHLH123 family 361 423 - -
Phac2g03305 474 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 177 452 - -
Phac2g03305 474 MobiDBLite consensus disorder prediction 139 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03305 Phac-Chr2 34641891 34645678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03305 212 474 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 44.280 4.76e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03305 - - pvu:PHAVU_002G2196001 745.347