LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g03259	ATGGCTTGGTGGCATAATATTGTTCATAATCCAATTCTTTTCTGTCATGCAATGATAACAATTTTTATCCTCCAAATAATCCCTGTTGCAAACTCACTATCATTTTATTACCCCAACTTTAAGAATGGTGATGTAAAATGGGAAGGGGATGCTTCTATTCTAAAAGGAGCTATCCAAGTCACATCCAACACCATAGACCAAAACAACAATTACAGTGTTGGGAGAGTCACAAGTTATGAACAGATGCTCCTCTGGGATATGAAGTCTGGAAAGCTTGCTGATTTCACTACCAAATTTTCCTTTGTTATTTTTTCAGAAAAGAGTTACTATGGAGATGGAATGTCATTCTTCCTGGCTGATCCTAATCTCCCACTTCTAAAGGATATTAAAGAAGGAGGTGGTCTTGGACTTGTGGATGGCGAACAAGTATTGAATTCAACTCAACACCCGTTTGTAGCAGTGGAGTTTGACACCTTCCACAACAAATTATGGGACCCTCCAGGTGGCACTCATGTAGGTTTGAATTTCAACTCTATGAAGTCCAACATAACTAAGTCATGGTTGACAGATGTTCAAATTTGGAATGTTTATAATTGCAGCATTAAGTACAATTCAAGTACTCTAAATTTGAGCGTTTCATTCACAATGTACAATGATAGTAAACCAGTTGAAGAATACGTTTCATACAAGGTTGATTTGAGAGATCACTTACCAGGGAGGGTTATTCTTGGTTTTTCTGCTGCAACAGGGAGATTGTATGAGGTGCATACATTGAGATCATGGTCATTTAGTTCAAATCTACAAAGTGATGAGAACACAGATGAGATAAAACCAGAAGCAGTCCCACCAGATTCCGATCTTATGCCTGAAAAAGGAAAGAAAATAGAATTGAGGGTAGGGCTTGGAATTGGTCTAGGCTTGGTTTTGAGTTTCTCAGGGCTGATTTTTACTTTATTGTGGAAGAGGAGTAGAGGTAGAAAAAAAGAGTTAGTTTTTAATCTCAATATGGGTGATGTATTCCCAAAGGGCACTGGACCTAAGAGCTTTTCCTATAATGAGCTAGCAAGTGCTACAAACAAATTTTCCGAGTCTGAGAAGCTGGGGCAAGGTGGTTTTGGTGGTGTGTATAAAGGTTATTTGAAAGACATAAAGTCCTATGTTGCTATCAAAAGAATATCAAGAGAGTCTAGACAGGGAATGAAGGAGTACGTGACAGAAGTGAAGGTAATAAGCCAATTGAGACATAGGAATTTAGTACAACTTATTGGTTGGTGTCATGAGAAGAATGACTTTATCCTCGTATATGAGTTCATGCCAAATGGAAGCTTAGACTCTCATCTGTATAAAGTGAAAAGCTTCTTAACTTGGACAGTGAGGTATAATATAGCTTTGGGCTTGGCTTCAGCATTGCTTTACTTACAAGAAGAGTGGGAGCAGTGTGTGATTCACAGGGATATTAAATCAAGCAACATAATGCTGGATTCAAGTTTCAATGCTAAGCTTGAAATGATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCACTGTTTTCTTCAGTTTCATCCTTCCTTTGGGAAACAAGTTAG	1590	0.383	MAWWHNIVHNPILFCHAMITIFILQIIPVANSLSFYYPNFKNGDVKWEGDASILKGAIQVTSNTIDQNNNYSVGRVTSYEQMLLWDMKSGKLADFTTKFSFVIFSEKSYYGDGMSFFLADPNLPLLKDIKEGGGLGLVDGEQVLNSTQHPFVAVEFDTFHNKLWDPPGGTHVGLNFNSMKSNITKSWLTDVQIWNVYNCSIKYNSSTLNLSVSFTMYNDSKPVEEYVSYKVDLRDHLPGRVILGFSAATGRLYEVHTLRSWSFSSNLQSDENTDEIKPEAVPPDSDLMPEKGKKIELRVGLGIGLGLVLSFSGLIFTLLWKRSRGRKKELVFNLNMGDVFPKGTGPKSFSYNELASATNKFSESEKLGQGGFGGVYKGYLKDIKSYVAIKRISRESRQGMKEYVTEVKVISQLRHRNLVQLIGWCHEKNDFILVYEFMPNGSLDSHLYKVKSFLTWTVRYNIALGLASALLYLQEEWEQCVIHRDIKSSNIMLDSSFNAKLEMMPVPTYLPPTIKALFSSVSSFLWETS*	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g03259	529	MobiDBLite	consensus disorder prediction	272	287	-	-
	Phac2g03259	529	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	481	493	IPR008271	GO:0004672\|GO:0006468
	Phac2g03259	529	ProSitePatterns	Protein kinases ATP-binding region signature.	367	390	IPR017441	GO:0005524
	Phac2g03259	529	ProSitePatterns	Legume lectins beta-chain signature.	152	158	IPR019825	-
	Phac2g03259	529	SMART	serkin_6	361	525	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03259	529	FunFam	L-type lectin-domain containing receptor kinase IX.1	31	276	-	-
	Phac2g03259	529	PANTHER	-	59	501	-	-
	Phac2g03259	529	SUPERFAMILY	Concanavalin A-like lectins/glucanases	31	273	IPR013320	-
	Phac2g03259	529	CDD	lectin_legume_LecRK_Arcelin_ConA	33	267	IPR001220	GO:0030246
	Phac2g03259	529	SUPERFAMILY	Protein kinase-like (PK-like)	346	501	IPR011009	-
	Phac2g03259	529	MobiDBLite	consensus disorder prediction	268	287	-	-
	Phac2g03259	529	ProSiteProfiles	Protein kinase domain profile.	361	529	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03259	529	FunFam	L-type lectin-domain containing receptor kinase IX.1	346	437	-	-
	Phac2g03259	529	Pfam	Protein kinase domain	362	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03259	529	Gene3D	-	30	279	-	-
	Phac2g03259	529	Gene3D	Phosphorylase Kinase; domain 1	346	437	-	-
	Phac2g03259	529	Pfam	Legume lectin domain	32	274	IPR001220	GO:0030246
	Phac2g03259	529	Gene3D	Transferase(Phosphotransferase) domain 1	438	506	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g03259	Phac-Chr2	34123836	34125842	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g03259	22	501	Receptor kinase-like Gene Family	AT5G10530	43.177	8.39e-116	355

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Phac2g03259		Lectin_legB	6.7e-62	CL0004

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g03259	-		-	gmx:100780181	835.484