Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03252 ATGTCTTCTCTCTGGTTTCTTAAACTCATCCTCAAATGTCTTGATCATTGTGCATGGTTCCAGTTCTGGCCTTACACTAAGCTAATGATCATCCTCTGGCTCATCCTACCAGACTTTGAACGAGCTTCTTATGCCTACAATAATATTATTCGCAAATGCTTCTCAAATCCACAAGCAGCCATACGTAGTTTAAATAACTGGAGGAAGTTTTTTGTCAAGAAAGATAACTTTTTACTGCATGCAGAGAGATATGTAGAAGAGAATGGAGCAGAAGCCTTAATGAAACTCATTGCTAGCAAGAACACGACTTGCAAACCTGTCGCAGAAGCAACAAGTGCAAGTAGAGTTACTGAACATGAAGAAATGCAAAAGACAAATGAGAAAAATCTCCAAACAGAGCGCAAAGCCACCAAAGATTTGGAAGTGATCGAAAAAAAAGAAATTCCTACAGGCAATCAAGATATTCCTGTGGTGCCTAAAGTTGTGCAAAGTCAGAATGCTTCACCAACCATGTTGAAAACTAAAGGAGTAGTGATAGACAAGGCTGATGGAGAACTTCCTCAGATTTCTATACATAAGGAAGTTCAGAAGGAGTGGACTTGCGCTTTATGCCAGGTAACAACAACGAGCGAGAAAACCTTGAATGAACACCTTAAAGGGAGCAAACACAGGGCTAAGGAGAATGATATGAAGGCAAAGATTCAACCTGTTTCACAGAAGCTGAAAAGTGATCATTCCAAAGAGGAAATAAAACAGAAGAACATCAACCATGAGCTAAATTCCAAGACCAAGAATGGAGAGAAACTGCAAAAGAAACCTGCTGGGACGAATAATTCGGCAATAAGATGTGAAGTCTGTAATGTGAAATGCTCTAGCGAGATAGCCTTGGCCTCTCACAGATATGGGAAGAAGCATTTGGCTAAAATTTCAAGTTTAAATCTGAAGTGTGTGAATAACAGGTAA 963 0.3956 MSSLWFLKLILKCLDHCAWFQFWPYTKLMIILWLILPDFERASYAYNNIIRKCFSNPQAAIRSLNNWRKFFVKKDNFLLHAERYVEENGAEALMKLIASKNTTCKPVAEATSASRVTEHEEMQKTNEKNLQTERKATKDLEVIEKKEIPTGNQDIPVVPKVVQSQNASPTMLKTKGVVIDKADGELPQISIHKEVQKEWTCALCQVTTTSEKTLNEHLKGSKHRAKENDMKAKIQPVSQKLKSDHSKEEIKQKNINHELNSKTKNGEKLQKKPAGTNNSAIRCEVCNVKCSSEIALASHRYGKKHLAKISSLNLKCVNNR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03252 320 PANTHER OS06G0651300 PROTEIN-RELATED 112 313 - -
Phac2g03252 320 Pfam TB2/DP1, HVA22 family 16 53 IPR004345 -
Phac2g03252 320 SMART ZnF_U1_5 278 312 IPR003604 GO:0003676|GO:0008270
Phac2g03252 320 SMART ZnF_U1_5 196 230 IPR003604 GO:0003676|GO:0008270
Phac2g03252 320 Pfam Zinc-finger of C2H2 type 282 305 - -
Phac2g03252 320 Pfam Zinc-finger of C2H2 type 199 223 - -
Phac2g03252 320 SMART c2h2final6 281 305 IPR013087 -
Phac2g03252 320 SMART c2h2final6 199 223 IPR013087 -
Phac2g03252 320 MobiDBLite consensus disorder prediction 111 130 - -
Phac2g03252 320 MobiDBLite consensus disorder prediction 114 130 - -
Phac2g03252 320 MobiDBLite consensus disorder prediction 226 249 - -
Phac2g03252 320 SUPERFAMILY beta-beta-alpha zinc fingers 271 310 IPR036236 -
Phac2g03252 320 Gene3D Classic Zinc Finger 238 311 - -
Phac2g03252 320 Gene3D Classic Zinc Finger 181 229 - -
Phac2g03252 320 SUPERFAMILY beta-beta-alpha zinc fingers 189 231 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03252 Phac-Chr2 34069060 34072690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03252 198 313 C2H2 Transcription Factor Family AT2G19380 26.724 2.08e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03252 - - pvu:PHAVU_002G214600g 595.504