Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03251 ATGTCTTCTCTCTGGTTTCTTAAACTCATCCTCAAATGTCTTGATCATTGTGCATGGCCTCTTCTTGCTTTGGGGTACCCTTTATGTGCTTCTGTACAAGCCATTGAGACCGATTCCTACAAAGAAACTAAGGATTTGATATCATATTGGATACTCCTCTCGCTACTATACCTATTTGAGTATGCGTTTTTTAGGCTTCTTCAATGGTTCCAGTTCTGGCCTTACACTAAGCTAATGATCATCCTCTGGCTCATCCTACCAGACTTTGAACGAGCTTCTTATGCCTACAATAATATTATTCGCAAATGCTTCTCAAATCCACAAGCAGCCATACGTAGTTTAAATAACTGGAGGAAGTTTTTTGTCAAGAAAGATAACTTTTTACTGCATGCAGAGAGATATGTAGAAGAGAATGGAGCAGAAGCCTTAATGAAACTCATTGCTAGCAAGAACACGACTTGCAAACCTGTCGCAGAAGCAACAAGTGCAAGTAGAGTTACTGAACATGAAGAAATGCAAAAGACAAATGAGAAAAATCTCCAAACAGAGCGCAAAGCCACCAAAGATTTGGAAGTGATCGAAAAAAAAGAAATTCCTACAGGCAATCAAGATATTCCTGTGGTGCCTAAAGTTGTGCAAAGTCAGAATGCTTCACCAACCATGTTGAAAACTAAAGGAGTAGTGATAGACAAGGCTGATGGAGAACTTCCTCAGATTTCTATACATAAGGAAGTTCAGAAGGAGTGGACTTGCGCTTTATGCCAGGTAACAACAACGAGCGAGAAAACCTTGAATGAACACCTTAAAGGGAGCAAACACAGGGCTAAGGAGAATGATATGAAGGCAAAGATTCAACCTGTTTCACAGAAGCTGAAAAGTGATCATTCCAAAGAGGAAATAAAACAGAAGAACATCAACCATGAGCTAAATTCCAAGACCAAGAATGGAGAGAAACTGCAAAAGAAACCTGCTGGGACGAATAATTCGGCAATAAGATGTGAAGTCTGTAATGTGAAATGCTCTAGCGAGATAGCCTTGGCCTCTCACAGATATGGGAAGAAGCATTTGGCTAAAATTTCAAGTTTAAATCTGAAGTGTGTGAATAACAGGTAA 1113 0.3962 MSSLWFLKLILKCLDHCAWPLLALGYPLCASVQAIETDSYKETKDLISYWILLSLLYLFEYAFFRLLQWFQFWPYTKLMIILWLILPDFERASYAYNNIIRKCFSNPQAAIRSLNNWRKFFVKKDNFLLHAERYVEENGAEALMKLIASKNTTCKPVAEATSASRVTEHEEMQKTNEKNLQTERKATKDLEVIEKKEIPTGNQDIPVVPKVVQSQNASPTMLKTKGVVIDKADGELPQISIHKEVQKEWTCALCQVTTTSEKTLNEHLKGSKHRAKENDMKAKIQPVSQKLKSDHSKEEIKQKNINHELNSKTKNGEKLQKKPAGTNNSAIRCEVCNVKCSSEIALASHRYGKKHLAKISSLNLKCVNNR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03251 370 SMART c2h2final6 331 355 IPR013087 -
Phac2g03251 370 SMART c2h2final6 249 273 IPR013087 -
Phac2g03251 370 Pfam Zinc-finger of C2H2 type 332 355 - -
Phac2g03251 370 Pfam Zinc-finger of C2H2 type 249 273 - -
Phac2g03251 370 PANTHER HVA22-LIKE PROTEINS 10 152 IPR004345 -
Phac2g03251 370 SUPERFAMILY beta-beta-alpha zinc fingers 321 360 IPR036236 -
Phac2g03251 370 MobiDBLite consensus disorder prediction 164 180 - -
Phac2g03251 370 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Phac2g03251 370 SMART ZnF_U1_5 246 280 IPR003604 GO:0003676|GO:0008270
Phac2g03251 370 SMART ZnF_U1_5 328 362 IPR003604 GO:0003676|GO:0008270
Phac2g03251 370 Gene3D Classic Zinc Finger 288 361 - -
Phac2g03251 370 Gene3D Classic Zinc Finger 231 279 - -
Phac2g03251 370 MobiDBLite consensus disorder prediction 161 180 - -
Phac2g03251 370 SUPERFAMILY beta-beta-alpha zinc fingers 239 281 IPR036236 -
Phac2g03251 370 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03251 Phac-Chr2 34069060 34072690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03251 248 363 C2H2 Transcription Factor Family AT2G19380 26.724 7.66e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03251 - - pvu:PHAVU_002G214600g 699.508