Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03241 ATGGATATGGTGAATAATCGCTGTCAAAACGGGGAAGAGCCGCAGGTGGATGTCCTCAGTTACGCCAATGGTTCCGATGAAGGGGAAGAAGCTGCAACTTGTCCGCTTGTCCATGCTTCTTCTGCTTTGCACACCAGAACCAGTGAACTTACCATTTCCTTTGAGGGCGAGGTCTATGTTTTCCCTGCTGTTACTCCACAAAAGGTGCAGGCTGTATTATTACTGTTGGGAGGGCAGGAGATGCCAAATACCGTCCCTACCTCAAACTTTTTGTTGCAGCAAAACAGTCAAGACATTAAGGAAATTAATGATCCTTCCCGTTGTTCAAAACTTTCCCGAAGAATTGCATCGCTTGTTAGGTTTCGTGAAAAACGAAAAGAGAGATGTTTTGAGAAGAAAATCCGATACTCATGCCGTAAAGAGGTAGCCCAGAGGATGCATCGTAAGAATGGACAATTTGCTTCACTGAAGGAGGATTACAAATCTCATGCTGAAAATTGGGATTCAAGCAATGGTACACCTGACCCAGAATATAATGAACGTAGATGCCAACATTGTGGAATTAGTGAGAAGTCTACTCCAGCCATGCGTCGGGGACCAGCAGGTCCAAGATCACTATGCAATGCCTGTGGACTTATGTGGGCTAATAAGGGAACTCTGAGAGATCTCACCAAAGCAGGAAGGATTGCTTTTGAACAAAATGAACTGAGAAGTAATTTGAACTTTCGCATATTCGGCTCACTCGCAGAGGATACTTCAGCTGATATAAAGCCTTCAAAACCAGAAGCAGAACATTCTTGTGCCAAGCAGGACAAAGAGGGAAGCCCTGAGGAAACAAAGCCTGTGCAAATGGATTCCAGACGGTCACCCGAGAAAACAAATGAGCAGTTTATCGTTGGAACTGCTGAATCGGTTACTGACAACTTGCCCATCCAAGTGGAGAATCATGCTCTTGGTCTGCATGAGCAGGATACTACTCTTGAGGATCTTGCTGATGCTTCTGGGACCGAGTTTGAGATTCCCGCAGGTTTTGATGAACAGGTTGACATCGATGATTCCAACATGAGGACATATTGGCTGTGA 1083 0.4515 MDMVNNRCQNGEEPQVDVLSYANGSDEGEEAATCPLVHASSALHTRTSELTISFEGEVYVFPAVTPQKVQAVLLLLGGQEMPNTVPTSNFLLQQNSQDIKEINDPSRCSKLSRRIASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQFASLKEDYKSHAENWDSSNGTPDPEYNERRCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLTKAGRIAFEQNELRSNLNFRIFGSLAEDTSADIKPSKPEAEHSCAKQDKEGSPEETKPVQMDSRRSPEKTNEQFIVGTAESVTDNLPIQVENHALGLHEQDTTLEDLADASGTEFEIPAGFDEQVDIDDSNMRTYWL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03241 360 SMART GATA_3 177 230 IPR000679 GO:0006355|GO:0043565
Phac2g03241 360 ProSiteProfiles GATA-type zinc finger domain profile. 177 234 IPR000679 GO:0006355|GO:0043565
Phac2g03241 360 MobiDBLite consensus disorder prediction 255 292 - -
Phac2g03241 360 Pfam tify domain 47 77 IPR010399 -
Phac2g03241 360 SMART tify_2 43 78 IPR010399 -
Phac2g03241 360 MobiDBLite consensus disorder prediction 253 294 - -
Phac2g03241 360 CDD ZnF_GATA 182 225 IPR000679 GO:0006355|GO:0043565
Phac2g03241 360 ProSiteProfiles Tify domain profile. 43 78 IPR010399 -
Phac2g03241 360 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 180 234 - -
Phac2g03241 360 PANTHER GATA TRANSCRIPTION FACTOR 28 36 339 IPR045280 GO:0006355
Phac2g03241 360 Gene3D - 175 235 IPR013088 GO:0006355|GO:0008270
Phac2g03241 360 Pfam GATA zinc finger 183 219 IPR000679 GO:0006355|GO:0043565
Phac2g03241 360 ProSiteProfiles CCT domain profile. 114 156 IPR010402 GO:0005515
Phac2g03241 360 ProSitePatterns GATA-type zinc finger domain. 183 210 IPR000679 GO:0006355|GO:0043565
Phac2g03241 360 Pfam CCT motif 114 155 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03241 Phac-Chr2 33993394 34000933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03241 49 226 Tify Gene Family AT1G51600 55.676 9.54e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac2g03241 CCT 4.3e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03241 - - gmx:102669848 562.377