Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03211 ATGGAGCTGCATCACAGAAAATTGAAGCCATATGATGAACCTCCAGTTTCTCCTGATGATTCGTATGGAAGTCCCAACACCCACCAAAAAACCACATACTTGATCATCTGTTTTTCCGTTGTAGCCGCCGTTTTCGTTGTCCTCTGTTCCTACGCCATCTATGTCAAGTTTTTCTCTCCTGGGAACAGGTCTGTGAGGAGAACCTTGTCACGGCCTCAAACTGAGGAAGATTTCTTAGACGAGGAAGAACATGGCCCTGTGGTTGACCACCCCATCTGGTACATCCGCACCACTGGCCTCCAACAATCAGTGATCGGTGGCATCACCGTTTGCAAGTACAAGAAAGATGAAGGCTTGATTGAAGGGTCGGAATGTTCCGTCTGTTTGAGCGAGTTTGAAGAGGATGAGAGTCTCAGGCTTTTGCCAAAGTGTAACCACGCTTTTCACTTGCCTTGCATTGACACCTGGCTTAGATCGCACACCAATTGCCCCATGTGCCGTGCTCCTATTGTTACTGACCCCACAAGGGTTCCATCCATGGACCCCAATGCTTTTGGTTCCAGGTCTTTTGTGGAGATGGAGGTTTCGGAAAGTGGTGGTGGAGGTGAACATGATCATGCTCATGCTCAAGCTCAAGCTCAAGACCAACATGGTGATGATTTGTTGAGGGGTGAGGTAGAGGAAGAAGTTGAAGTGTGTGAAACTGAGAACTCGGCTACAGAAGTGGTGCCTGTGCAGCCAAGAAGATCAGTGTCTCTGGATTCTTCTTCTGCTGCTAAGATCAGTCTTGCTCTTGTAACTGTTGTGTCAGGAGATTCCCATGGGAATAGTTCAAAGAGGGTTAAAGCTGGTTGCAGTTCTTCTTCTTCTTCTTCATCCACTAGTTCCATCAAGAGGTCACGATCCTTCAATGCCAAACATTTAATATCATGGTATAGCCGCAGCCAGAGAAAGCCAAACGCTCCATTGAGAAGCTTCTGA 981 0.474 MELHHRKLKPYDEPPVSPDDSYGSPNTHQKTTYLIICFSVVAAVFVVLCSYAIYVKFFSPGNRSVRRTLSRPQTEEDFLDEEEHGPVVDHPIWYIRTTGLQQSVIGGITVCKYKKDEGLIEGSECSVCLSEFEEDESLRLLPKCNHAFHLPCIDTWLRSHTNCPMCRAPIVTDPTRVPSMDPNAFGSRSFVEMEVSESGGGGEHDHAHAQAQAQDQHGDDLLRGEVEEEVEVCETENSATEVVPVQPRRSVSLDSSSAAKISLALVTVVSGDSHGNSSKRVKAGCSSSSSSSSTSSIKRSRSFNAKHLISWYSRSQRKPNAPLRSF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03211 326 CDD RING-H2_EL5-like 124 167 - -
Phac2g03211 326 MobiDBLite consensus disorder prediction 271 300 - -
Phac2g03211 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 174 IPR013083 -
Phac2g03211 326 MobiDBLite consensus disorder prediction 198 217 - -
Phac2g03211 326 SUPERFAMILY RING/U-box 116 174 - -
Phac2g03211 326 MobiDBLite consensus disorder prediction 193 217 - -
Phac2g03211 326 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 20 187 IPR044675 -
Phac2g03211 326 Pfam Ring finger domain 124 167 IPR001841 -
Phac2g03211 326 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Phac2g03211 326 SMART ring_2 125 166 IPR001841 -
Phac2g03211 326 FunFam RING-H2 finger protein ATL54 100 173 - -
Phac2g03211 326 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03211 Phac-Chr2 33565220 33568789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03211 35 210 C3H Transcription Factor Family AT1G72220 48.913 1.26e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03211 - - vun:114177727 504.597