Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03191 ATGGAAAACGACGACGTTGAAATGCTCGGTTCAGACAGCAACGAAGCTGGCTTGGAGTTGGATGGCATGAAGAAGCGCTTGAAGGAAATGGAAGACGAAGCTTCTGCTTTGCGGGAGATGCAGGCCAAGGTCGAGAAGGAAATGGGATCTGTTCAAGCTCCTGCTCCTGCTGCTTCGAGTCAGAACAATAAAGAGGAAGTAGATTCTCGATCAGTCTTTGTCGGCAATGTGGACTATTCATGTACTCCAGAAGAAGTGCAGCAGCATTTCCAGTCATGTGGAACCGTAAACCGAGTCACCATCCGAACTGATAAGTTTGGCCAACCAAAGGGCTATGCTTACATAGAGTTTCTTGAAGTGCAGGCTGTTCAAGAAGCTCTGTTGCTGAATGAATCTGAACTACACGGGCGTCAATTGAAGGTTACTGCTAAGAGGACCAACATACCAGGGATGAAGCAATATCGTCCTCGCCGGCCTAATCCTTACCAGGGGTTTCGAGGCAGAGCCCCGTATGCACCTCCTTTTGCTTATGCTCCTTTTGGATATGGGTATGTTATTTTCATTTGTTTCCTTTCCATGGGCATTTCATCTTGGACCACAAAAACATCAACCCACGCCAGAAATGAAGGGAGGGATTTATTTGGGGTGCAGGAGGCTGGTACCCCATTCTAA 672 0.4762 MENDDVEMLGSDSNEAGLELDGMKKRLKEMEDEASALREMQAKVEKEMGSVQAPAPAASSQNNKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYIEFLEVQAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNPYQGFRGRAPYAPPFAYAPFGYGYVIFICFLSMGISSWTTKTSTHARNEGRDLFGVQEAGTPF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03191 223 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 13 158 - -
Phac2g03191 223 SMART rrm1_1 71 142 IPR000504 GO:0003723
Phac2g03191 223 MobiDBLite consensus disorder prediction 1 20 - -
Phac2g03191 223 CDD RRM_II_PABPs 71 142 - -
Phac2g03191 223 Gene3D - 13 143 IPR012677 -
Phac2g03191 223 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 146 IPR000504 GO:0003723
Phac2g03191 223 MobiDBLite consensus disorder prediction 30 45 - -
Phac2g03191 223 MobiDBLite consensus disorder prediction 30 67 - -
Phac2g03191 223 SUPERFAMILY RNA-binding domain, RBD 57 168 IPR035979 GO:0003676
Phac2g03191 223 Coils Coil 13 47 - -
Phac2g03191 223 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 140 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03191 Phac-Chr2 33393271 33398929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03191 71 141 Eukaryotic Initiation Factors Gene Family AT2G36660 29.167 1.06e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03191 K14396 - csv:101213499 291.967