Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03173 ATGGCGGAGCCTGCTTCTTACGGTTTGGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCCCAGAATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTTGCAATTATCGGATGTTTCAAATCACACCAGAACCACCTAACAGGCCACCAAGTGGCTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATATTTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAGTTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGGTGAGGCTACATCAGATTCCCAGAATGGAAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACAATCCTATCATGAATCAAAACGTTTGGGGCCGATGGATAAGATTGATGCTCGTTCAAGTAGTTCATATCTTACGCATCCATTTTCAGGTGATCCTGCACAGTTTCCAGTTCCTGGAGCAGAATATATCCCATTTGTTCAGGGTCATAAGTCTAGAGCTAGTGATACTGCTTACACCGAGGGTCATAGAGCACATGACATTGCATCATGGAACAATGCCATGGAGCAGTCTTCAGGAAAGAATACTGCTACTTCTCTTGTATCATCTACATCTATTCCATCAAGTGCATCGGGAAACATCCTTGAAGAAAACAATACTGTTCCAGGCAACCTTTTAGGGCGTAAAAATGCCCTCACTGAAGACGAAAGGGCCTCACAGCCTATCCACTCAAATTGGCAGATTCCTTTTGAAGACGATACAATAGAATTACCTAAGTGGAGCCTTACCCAATCATTGGGCTTGGAATTTGGATCTGATTATGGCACTAGTTTACTGGGGGATGTAACTGATACTGCAGGCCCAGAAATTGTTGCTGAGATGTTCACTTTTAATGGTGAGTTAAAAGAGAAGTCTGTGCACCAAAACATCTCAAAGCAGTATACAAACACACAATCTCAACCTGCAACGAAATCCAATTCTGAGTATGAAGTGCCTGGTGAAGCCAGTATTAATTATGCCTTGACCATGAAGCGTGGATTATTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAATTTGCAGGTGTGGATGATCTGCATATGCAGTCCTCCCCGGGCATTTCATGGAACACAGATGATTGTGGAGATGTGATAGATGATACATCATTAAACCTGTCCCTTTCTCAAGATCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTATGGTGACAGCATGTAATTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGGAAACGGAATTCTATGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACACGTGCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAAGGTATCGACAGAAATGTCGATTTTGCAGATTTTTTTAACAGTTCAACTGAAATGGTCCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAATTCAGCGAACACTTCAAATCAAGTGCTTGAGGATGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAAGAATATTCATGTAGAGAAGAGACAACTGTGGAGATGGATACAACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGACCTTGTACTCATGGCTTCTTCGCAAAGTAACTGAAACTGGTAAAGGGCCTCGTGTGTTAAGTGAGGAAGGGCAGGGCGTGTTACATTTAATTGCTGCTCTTGGTTACGATTGGGCCATAAAACCAATCATAACTGCTGGAGTCAATATCAACTTCCGTGATGCGAGTGGATGGACAGCTTTACATTGGGCTGCATACTGTGGCCGGGAGCGAACAGTTGCAGTCCTTGTGTCCATGGGTGCAGACACTAAAGCAGTGACAGATCCATGTTCAGAAGCTCGTGAAGGTAGATCACCTGCGGATCTTGCTTCTAGCAATGGCCACAAAGGACTTTCCGGTTTTCTTGCTGAGTCATTATTAACTAGCCAGCTTGAATTACTCACAATGGAGGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAATGAAAGCAGTACAAACAGTTTCAGAGCGAACTGCTTTACCTGTGCTTTATGGTGATTTACCAGATGTTATCTGCCTTAAGGATTCCCTCAATGCTGTCCGGAATGCTACACAAGCTGCTGATCGAATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAACAGTTAGCTCAGCATGATGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCCCTTTTAGCTTCTAGGACGAACAAATCTGGACAAGGAGAGGGTTTAGCCAGTGCTGCTGCAATACAAATACAGAAAAAGTTTCGGGGTTGGAAGAAAAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAACCAATCATATGGTCCGTGGGAATCCTGGAAAAGGTCATATTACGCTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGATCAGATACCGTGAACAAGGTCGTCCCTGACCAACCAAGCGAATCTCTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAGAGTGAAGCAAGGTTCAAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGATAATTTGAATTCGATGAATTCTGAAGAGGCAGTTGACGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCTTTCGATTGA 3261 0.421 MAEPASYGLGPRLDLQQLQLEAQNRWLRPAEICEILCNYRMFQITPEPPNRPPSGSLFLFDRKVLRYFRKDGHIWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENESFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNVGGKTYSGEATSDSQNGSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLQSYHESKRLGPMDKIDARSSSSYLTHPFSGDPAQFPVPGAEYIPFVQGHKSRASDTAYTEGHRAHDIASWNNAMEQSSGKNTATSLVSSTSIPSSASGNILEENNTVPGNLLGRKNALTEDERASQPIHSNWQIPFEDDTIELPKWSLTQSLGLEFGSDYGTSLLGDVTDTAGPEIVAEMFTFNGELKEKSVHQNISKQYTNTQSQPATKSNSEYEVPGEASINYALTMKRGLLDGEESLKKVDSFSRWITKEFAGVDDLHMQSSPGISWNTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPMVTACNWSCMFGEVEVPAEVLGNGILCCQAPPHKIGRVPFYVTRANRFACSEVREFEYREGIDRNVDFADFFNSSTEMVLHLRLVGLLSLNSANTSNQVLEDDMEKRNLIFKLISLKEEEEYSCREETTVEMDTTKHKLKEHMFHKQVKETLYSWLLRKVTETGKGPRVLSEEGQGVLHLIAALGYDWAIKPIITAGVNINFRDASGWTALHWAAYCGRERTVAVLVSMGADTKAVTDPCSEAREGRSPADLASSNGHKGLSGFLAESLLTSQLELLTMEENKDGRKETSGMKAVQTVSERTALPVLYGDLPDVICLKDSLNAVRNATQAADRIHQVYRMQSFQRKQLAQHDDDEFGLSDQQALSLLASRTNKSGQGEGLASAAAIQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRSDTVNKVVPDQPSESLKEDDYDFLKEGRKQSEARFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGDNLNSMNSEEAVDGVEDLIDIDMLLDDENFLPIAFD* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03173 1086 FunFam Calmodulin-binding transcription activator 2 908 956 - -
Phac2g03173 1086 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Phac2g03173 1086 FunFam Calmodulin-binding transcription activator 2 494 590 - -
Phac2g03173 1086 CDD IPT 500 588 - -
Phac2g03173 1086 Pfam IPT/TIG domain 501 586 IPR002909 -
Phac2g03173 1086 SMART ANK_2a 734 763 IPR002110 GO:0005515
Phac2g03173 1086 MobiDBLite consensus disorder prediction 289 310 - -
Phac2g03173 1086 Gene3D Immunoglobulins 494 589 IPR013783 -
Phac2g03173 1086 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Phac2g03173 1086 ProSiteProfiles Ankyrin repeat region circular profile. 734 760 - -
Phac2g03173 1086 Pfam IQ calmodulin-binding motif 934 953 IPR000048 GO:0005515
Phac2g03173 1086 Pfam IQ calmodulin-binding motif 911 929 IPR000048 GO:0005515
Phac2g03173 1086 Gene3D - 660 806 IPR036770 -
Phac2g03173 1086 ProSiteProfiles Ankyrin repeat profile. 734 766 IPR002110 GO:0005515
Phac2g03173 1086 Pfam Ankyrin repeat 735 765 IPR002110 GO:0005515
Phac2g03173 1086 Gene3D - 909 955 - -
Phac2g03173 1086 MobiDBLite consensus disorder prediction 147 187 - -
Phac2g03173 1086 SUPERFAMILY Ankyrin repeat 689 795 IPR036770 -
Phac2g03173 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 909 959 IPR027417 -
Phac2g03173 1086 SUPERFAMILY E set domains 501 587 IPR014756 -
Phac2g03173 1086 ProSiteProfiles IQ motif profile. 932 956 IPR000048 GO:0005515
Phac2g03173 1086 SMART iq_5 908 930 IPR000048 GO:0005515
Phac2g03173 1086 SMART iq_5 931 953 IPR000048 GO:0005515
Phac2g03173 1086 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1048 - -
Phac2g03173 1086 SMART CG_1_2 18 136 IPR005559 GO:0003677
Phac2g03173 1086 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03173 Phac-Chr2 33253842 33264696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03173 1 1067 CAMTA Transcription Factor Family AT5G64220 52.033 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac2g03173 CG-1 2.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03173 K21596 - gmx:100795682 1823.52