Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03172 ATGTTTCAAATCACACCAGAACCACCTAACAGGCCACCAAGTGGCTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATATTTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAGTTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGGTGAGGCTACATCAGATTCCCAGAATGGAAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACAATCCTATCATGAATCAAAACGTTTGGGGCCGATGGATAAGATTGATGCTCGTTCAAGTAGTTCATATCTTACGCATCCATTTTCAGGTGATCCTGCACAGTTTCCAGTTCCTGGAGCAGAATATATCCCATTTGTTCAGGGTCATAAGTCTAGAGCTAGTGATACTGCTTACACCGAGGGTCATAGAGCACATGACATTGCATCATGGAACAATGCCATGGAGCAGTCTTCAGGAAAGAATACTGCTACTTCTCTTGTATCATCTACATCTATTCCATCAAGTGCATCGGGAAACATCCTTGAAGAAAACAATACTGTTCCAGGCAACCTTTTAGGGCGTAAAAATGCCCTCACTGAAGACGAAAGGGCCTCACAGCCTATCCACTCAAATTGGCAGATTCCTTTTGAAGACGATACAATAGAATTACCTAAGTGGAGCCTTACCCAATCATTGGGCTTGGAATTTGGATCTGATTATGGCACTAGTTTACTGGGGGATGTAACTGATACTGCAGGCCCAGAAATTGTTGCTGAGATGTTCACTTTTAATGGTGAGTTAAAAGAGAAGTCTGTGCACCAAAACATCTCAAAGCAGTATACAAACACACAATCTCAACCTGCAACGAAATCCAATTCTGAGTATGAAGTGCCTGGTGAAGCCAGTATTAATTATGCCTTGACCATGAAGCGTGGATTATTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAATTTGCAGGTGTGGATGATCTGCATATGCAGTCCTCCCCGGGCATTTCATGGAACACAGATGATTGTGGAGATGTGATAGATGATACATCATTAAACCTGTCCCTTTCTCAAGATCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTATGGTGACAGCATGTAATTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGGAAACGGAATTCTATGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACACGTGCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAAGGTATCGACAGAAATGTCGATTTTGCAGATTTTTTTAACAGTTCAACTGAAATGGTCCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAATTCAGCGAACACTTCAAATCAAGTGCTTGAGGATGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAAGAATATTCATGTAGAGAAGAGACAACTGTGGAGATGGATACAACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGACCTTGTACTCATGGCTTCTTCGCAAAGTAACTGAAACTGGTAAAGGGCCTCGTGTGTTAAGTGAGGAAGGGCAGGGCGTGTTACATTTAATTGCTGCTCTTGGTTACGATTGGGCCATAAAACCAATCATAACTGCTGGAGTCAATATCAACTTCCGTGATGCGAGTGGATGGACAGCTTTACATTGGGCTGCATACTGTGGCCGGGAGCGAACAGTTGCAGTCCTTGTGTCCATGGGTGCAGACACTAAAGCAGTGACAGATCCATGTTCAGAAGCTCGTGAAGGTAGATCACCTGCGGATCTTGCTTCTAGCAATGGCCACAAAGGACTTTCCGGTTTTCTTGCTGAGTCATTATTAACTAGCCAGCTTGAATTACTCACAATGGAGGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAATGAAAGCAGTACAAACAGTTTCAGAGCGAACTGCTTTACCTGTGCTTTATGGTGATTTACCAGATGTTATCTGCCTTAAGGATTCCCTCAATGCTGTCCGGAATGCTACACAAGCTGCTGATCGAATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAACAGTTAGCTCAGCATGATGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCCCTTTTAGCTTCTAGGACGAACAAATCTGGACAAGGAGAGGGTTTAGCCAGTGCTGCTGCAATACAAATACAGAAAAAGTTTCGGGGTTGGAAGAAAAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAACCAATCATATGGTCCGTGGGAATCCTGGAAAAGGTCATATTACGCTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGATCAGATACCGTGAACAAGGTCGTCCCTGACCAACCAAGCGAATCTCTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAGAGTGAAGCAAGGTTCAAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGATAATTTGAATTCGATGAATTCTGAAGAGGCAGTTGACGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCTTTCGATTGA 3141 0.4196 MFQITPEPPNRPPSGSLFLFDRKVLRYFRKDGHIWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENESFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNVGGKTYSGEATSDSQNGSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLQSYHESKRLGPMDKIDARSSSSYLTHPFSGDPAQFPVPGAEYIPFVQGHKSRASDTAYTEGHRAHDIASWNNAMEQSSGKNTATSLVSSTSIPSSASGNILEENNTVPGNLLGRKNALTEDERASQPIHSNWQIPFEDDTIELPKWSLTQSLGLEFGSDYGTSLLGDVTDTAGPEIVAEMFTFNGELKEKSVHQNISKQYTNTQSQPATKSNSEYEVPGEASINYALTMKRGLLDGEESLKKVDSFSRWITKEFAGVDDLHMQSSPGISWNTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPMVTACNWSCMFGEVEVPAEVLGNGILCCQAPPHKIGRVPFYVTRANRFACSEVREFEYREGIDRNVDFADFFNSSTEMVLHLRLVGLLSLNSANTSNQVLEDDMEKRNLIFKLISLKEEEEYSCREETTVEMDTTKHKLKEHMFHKQVKETLYSWLLRKVTETGKGPRVLSEEGQGVLHLIAALGYDWAIKPIITAGVNINFRDASGWTALHWAAYCGRERTVAVLVSMGADTKAVTDPCSEAREGRSPADLASSNGHKGLSGFLAESLLTSQLELLTMEENKDGRKETSGMKAVQTVSERTALPVLYGDLPDVICLKDSLNAVRNATQAADRIHQVYRMQSFQRKQLAQHDDDEFGLSDQQALSLLASRTNKSGQGEGLASAAAIQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRSDTVNKVVPDQPSESLKEDDYDFLKEGRKQSEARFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGDNLNSMNSEEAVDGVEDLIDIDMLLDDENFLPIAFD* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03172 1046 CDD IPT 460 548 - -
Phac2g03172 1046 ProSiteProfiles CG-1 DNA-binding domain profile. 1 101 IPR005559 GO:0003677
Phac2g03172 1046 SMART ANK_2a 694 723 IPR002110 GO:0005515
Phac2g03172 1046 Pfam IQ calmodulin-binding motif 894 913 IPR000048 GO:0005515
Phac2g03172 1046 Pfam IQ calmodulin-binding motif 871 889 IPR000048 GO:0005515
Phac2g03172 1046 ProSiteProfiles IQ motif profile. 892 916 IPR000048 GO:0005515
Phac2g03172 1046 SMART iq_5 891 913 IPR000048 GO:0005515
Phac2g03172 1046 SMART iq_5 868 890 IPR000048 GO:0005515
Phac2g03172 1046 MobiDBLite consensus disorder prediction 249 270 - -
Phac2g03172 1046 Gene3D - 869 915 - -
Phac2g03172 1046 ProSiteProfiles Ankyrin repeat profile. 694 726 IPR002110 GO:0005515
Phac2g03172 1046 ProSiteProfiles IQ motif profile. 869 898 IPR000048 GO:0005515
Phac2g03172 1046 FunFam Calmodulin-binding transcription activator 2 454 550 - -
Phac2g03172 1046 FunFam Calmodulin-binding transcription activator 2 868 916 - -
Phac2g03172 1046 Gene3D Immunoglobulins 454 549 IPR013783 -
Phac2g03172 1046 Pfam IPT/TIG domain 461 546 IPR002909 -
Phac2g03172 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 919 IPR027417 -
Phac2g03172 1046 Gene3D - 620 766 IPR036770 -
Phac2g03172 1046 Pfam Ankyrin repeat 695 725 IPR002110 GO:0005515
Phac2g03172 1046 MobiDBLite consensus disorder prediction 107 147 - -
Phac2g03172 1046 Pfam CG-1 domain 2 94 IPR005559 GO:0003677
Phac2g03172 1046 SUPERFAMILY E set domains 461 547 IPR014756 -
Phac2g03172 1046 ProSiteProfiles Ankyrin repeat region circular profile. 694 720 - -
Phac2g03172 1046 SUPERFAMILY Ankyrin repeat 649 755 IPR036770 -
Phac2g03172 1046 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 1008 - -
Phac2g03172 1046 SMART CG_1_2 1 96 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03172 Phac-Chr2 33253842 33264696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03172 2 1027 CAMTA Transcription Factor Family AT5G64220 51.585 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac2g03172 CG-1 3.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03172 K21596 - gmx:100795682 1756.88