Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03142 ATGAAGCAAGTGATTTCATCTTTCAGGTGTTTGTTTCTTCTTTGTGCAGTTTTGGTGCTTGACTTCATGGTCAAGGTTTCTGGCAACCAAGAAGGTGATGCCCTGGATGCATTGAAGGGCAATATGAATGATCCTAACAATGTTCTTCAGAGTTGGGATTCTACCCTTGTAAATCCTTGCACATGGTTTCATGTTACTTGCGATAATGACAATAGGGTGATCCGTGTTTATTCACTGGATCTTTCTCTGCCCAAATCTGAATATCTTTCTTTTGACAGGGAACTTTATAGTAATAATATAACTGGGAAAATCCCAATTGAGCTAGGGAGTTTGACAAACTTGGTGAGCTTGGATCTTTACTCGAACAAAATTACTGGTACCATTCCAGACGAATTGGCCAACCTTAAAAATCTACGTTTCCTGCGTCTCAACAATAACACCTTGTCAGGAAAAATTCCTATGCGTCTGACCAATGTCGATAAACTGCAAGTGCTTGATTTATCGAACAACAACTTAACAGGAGATGTCCCAACCACCGGTTCTTTTTCCTATTTTACTCCCATCAGTTTTAGGAATAATCCCCTATTGAATTATACTAGCATTCAATCTCCACCAGCTTCAGCACCGCCACAAAGTCCTCCAGCAGAGGGTGAAGCCTGGAGTGTGGAGGCTTTCCATTTACTTCTGTTAATCCATGTAGGTAACAATAACCGTGCTGTTGGAATCATTGCTGGAGGAGTTGCTGTGGGTGCTGCACTGTTGTTTGCAGCTCCTGTAATTGCACTTGTTTATTGTAAGAGAAGGAAACCACAGGATTTTTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGGGAACTACAAGTTGCAACAGATACCTTTAACAACAAAAACGTTCTTGGTAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAAATGGATATCTTGTAGCAGTAAAAAGACTCAAAGAGGAACGAACCCAGGGTGGGGAGATGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGCATGGTTTTTGTATGACACCTACTGAACGTTTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTTGCTTCATGTTTACGAGCACGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTGAAAGCACTTTTGAAAGACAAGAGGTTGGAGACACTGGTGGATGCAGATTTGGAGGGAAATTATGAGGAAGAGGAAGCGGAAGAGTTAATCCAAGTGGCCTTGTTATGCACACAAAGCTCCCCTTTGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGGCAGAAAAATGGGAAAAATGGTGGCAAAAAGAGGATAGAATCCAACAAAAGTTTGACCCCTCCAGTCTCCACCATGCTTACTGGCCATTATCAGACTCAACTTCAAATATTCTCCCAGATGAACTGTCAGGGCCTAGATGA 1539 0.423 MKQVISSFRCLFLLCAVLVLDFMVKVSGNQEGDALDALKGNMNDPNNVLQSWDSTLVNPCTWFHVTCDNDNRVIRVYSLDLSLPKSEYLSFDRELYSNNITGKIPIELGSLTNLVSLDLYSNKITGTIPDELANLKNLRFLRLNNNTLSGKIPMRLTNVDKLQVLDLSNNNLTGDVPTTGSFSYFTPISFRNNPLLNYTSIQSPPASAPPQSPPAEGEAWSVEAFHLLLLIHVGNNNRAVGIIAGGVAVGAALLFAAPVIALVYCKRRKPQDFFFDVAAEEDPEVHLGQLKRFSLRELQVATDTFNNKNVLGRGGFGKVYKGRLTNGYLVAVKRLKEERTQGGEMQFQTEVEMISMAVHRNLLRLHGFCMTPTERLLVYPFMANGSVASCLRARLANDDDVMLLDWVKALLKDKRLETLVDADLEGNYEEEEAEELIQVALLCTQSSPLERPKMSEVVRMLEGEGLAEKWEKWWQKEDRIQQKFDPSSLHHAYWPLSDSTSNILPDELSGPR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03142 512 Gene3D Ribonuclease Inhibitor 27 204 IPR032675 -
Phac2g03142 512 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Phac2g03142 512 SUPERFAMILY Protein kinase-like (PK-like) 400 468 IPR011009 -
Phac2g03142 512 SUPERFAMILY L domain-like 30 198 - -
Phac2g03142 512 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Phac2g03142 512 Gene3D Transferase(Phosphotransferase) domain 1 382 481 - -
Phac2g03142 512 SUPERFAMILY Protein kinase-like (PK-like) 284 396 IPR011009 -
Phac2g03142 512 ProSiteProfiles Protein kinase domain profile. 305 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03142 512 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Phac2g03142 512 Pfam Protein tyrosine and serine/threonine kinase 307 394 IPR001245 GO:0004672|GO:0006468
Phac2g03142 512 FunFam Somatic embryogenesis receptor kinase 1 27 207 - -
Phac2g03142 512 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Phac2g03142 512 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 414 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03142 Phac-Chr2 32979676 32985925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03142 393 512 Receptor kinase-like Gene Family AT4G33430 68.852 1.70e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac2g03142 PK_Tyr_Ser-Thr 7.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03142 K13416 K13418 gmx:100804180 532.332