Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03141 ATGGGCAACAAGAAGCGAGTGATTCCATATTTCATGTGTTTGTATGCTATTTTTTGGACATTTTTGGTGCTTCACTTGCTGCTCAAGGTTTCTGGCAATCCAGAAGGTGATGCCCTGACTACATTCAAGAATAATATGATAGATCCTACTGATGCTCTTCGTAGTTGGGATCCTACCGTTATAAATCCTTGTACATGGTTTCATGTTACTTGCAACGAAGAAAATAGCGTAATCCGTTTGGATCTTGGAAATGCAAATCTTTCGGGTCAGCTTGTTCCAGAGCTTGGTCAGCTCCCAAATTTGGAATATTTGGAACTTTATAACAATAATATAACTGGGGAGATCCCAAATGTGCTTGGAAATTTGACGAACTTGCAGACTTTGGATCTTTACTCGAACAACATTACTGGTCAAATTCCAGACGAATTAGCCAAACTTAAAAAACTGCGAAACCTGCGTCTCAACAGAAACAGCTTGTCAGGAAAGATTCCTGTGGGTTTGACCACAATTGATACACTGCGAGTTCTTGACTTATCGTACAACAACTTAACAGGGAATGTCCCAATCGATGGTTCATTTTCAAGTTTTACTCCCATCAGTTTTGACCATAATCCTTTCTTGAAGCAAACCACTCCAACATCACCACGCGTTATACAGAAACAAAATCCTTCAGGTAATAGTTTCATATCTATTGGAGTCATTGCTGGAGGAGTTGCCGTGGGTGCTGCACTGTTGTTTGCAGCTCCAGTAATTTCATTTGTTTACTGGAAAAGAAGGAAGCCACCAGATTATTTCTTTGATGTTGCAGCTGACGAGGATCCTGAAGTTAACTTTGGTCAACTTAAAAGGTTTTCGCTGCATGAACTGCTAGTTGCAACAGATGGCTTTAATAACAAAAACATTATTGGCAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAAATGGTGATCTTGTAGCAGTAAAAAGACTTAACCAGGAACGCATCCAGTGTGAGGAGAAACAATTTCAAACAGAAGTGGAAATTATCAGCATGGCTGTGCATCGAAATTTGCTTCGGCTGATTGGTTTTTGTATGACAACTACTGAAAGATTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTAGAATCATGTTTACGAGCACCAGAGTATCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAGATAATAACTGGACAGAGGGCTTATAATTTAGCACGACTTGCCATTAGTTCTGAGGTCATGTTGCTTGAATGGGTGAAATCACTTCTGAAAGAGAGGAAGTTGAAGACACTGGTGGATGCAGATTTACATGGAGATTATGACGAGGAGGAACTAGAGGAGTTAATCCAAATGGCATTGCTATGCACACAAAGCTCCCCTTTGGATAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGGAAGAAAAGTGGGATAAATGGTGGAAGAAAGAGGATATAATCCAAAAAGATTACAACCCCTTCAATCTCTACATAAATTATGACTCAACTTCAAATATTGCACCAGATGAATTGTCTGGTCCTAGATGA 1605 0.4 MGNKKRVIPYFMCLYAIFWTFLVLHLLLKVSGNPEGDALTTFKNNMIDPTDALRSWDPTVINPCTWFHVTCNEENSVIRLDLGNANLSGQLVPELGQLPNLEYLELYNNNITGEIPNVLGNLTNLQTLDLYSNNITGQIPDELAKLKKLRNLRLNRNSLSGKIPVGLTTIDTLRVLDLSYNNLTGNVPIDGSFSSFTPISFDHNPFLKQTTPTSPRVIQKQNPSGNSFISIGVIAGGVAVGAALLFAAPVISFVYWKRRKPPDYFFDVAADEDPEVNFGQLKRFSLHELLVATDGFNNKNIIGRGGFGKVYKGRLTNGDLVAVKRLNQERIQCEEKQFQTEVEIISMAVHRNLLRLIGFCMTTTERLLVYPFMVNGSVESCLRAPEYLSTGKSSEKTDVFGYGVMLLEIITGQRAYNLARLAISSEVMLLEWVKSLLKERKLKTLVDADLHGDYDEEELEELIQMALLCTQSSPLDRPKMSEVVRMLEGEGLEEKWDKWWKKEDIIQKDYNPFNLYINYDSTSNIAPDELSGPR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03141 534 FunFam Somatic embryogenesis receptor kinase 1 265 372 - -
Phac2g03141 534 Pfam Protein tyrosine and serine/threonine kinase 384 487 IPR001245 GO:0004672|GO:0006468
Phac2g03141 534 ProSiteProfiles Protein kinase domain profile. 296 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03141 534 ProSiteProfiles Leucine-rich repeat profile. 100 123 IPR001611 GO:0005515
Phac2g03141 534 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Phac2g03141 534 Gene3D Transferase(Phosphotransferase) domain 1 371 490 - -
Phac2g03141 534 FunFam Somatic embryogenesis receptor kinase 1 31 218 - -
Phac2g03141 534 SUPERFAMILY Protein kinase-like (PK-like) 280 490 IPR011009 -
Phac2g03141 534 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 497 - -
Phac2g03141 534 Pfam Protein kinase domain 297 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03141 534 SUPERFAMILY L domain-like 35 206 - -
Phac2g03141 534 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Phac2g03141 534 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Phac2g03141 534 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Phac2g03141 534 Pfam Leucine Rich Repeat 173 189 IPR001611 GO:0005515
Phac2g03141 534 Gene3D Phosphorylase Kinase; domain 1 265 370 - -
Phac2g03141 534 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03141 Phac-Chr2 32970929 32977307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03141 384 534 Receptor kinase-like Gene Family AT4G33430 65.605 2.36e-59 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac2g03141 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03141 K13416 - gmx:100804708 536.569