LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g03071	ATGGACTGGAGGCGTCGGACCAAGAAGCAGGCTCAGGCTCAGCCTCGGTTGGAGCGCCTCAACGCCAAAAAGGGCTTCAATTACCAACCACCACCCTCTCCACCATCTCCCTCTTCCACCCATTTGGATCGCCAAACCAGCTTCCGTCTCTTCGGCATCGACGGCGAGTTCGACCGTATCTTCCAGACCTTGGGCCTCACCGGCCCGGAAGACTTCTCCATCCCAGCCGCTGACTGGGAAGCCCGAAAGGCCCGCGTTGCTTCCTCCAACGCCGCCGGGCCCACCACTACCTCTCACGCGCTTATCCGCCCTTCTCCCGAGATCCATCCTCTTTCCGTCACCGCAACTACTGCGGCTACCCTCCAAGGCGACGTCGTTTCCGTTCGCGATTCCGTTCTGGGTTCCTCCCCTTGGTCCTCCGGGGAGCATGACGCGGGTAGGGGTAGTGTCGGCCGGTTGAGAAACGGAGAAAGGAGCGTGCTTTTCACCGATTCAGGTTCCTTCACCACTTCCCACGATGATGACAGTGACATTGGCGGCGAGAGGGTTTATTCGGTTTCTAATTCCGCCGCGCCGGATGAGCTGGCTGTGCCTTATGTCTCCTCCTTTTCCTTTGAGTGGTTCAGACAGACTTTCTCCTCCTGGCAAAAAGGTGACGTCTTGGGAAATGGGTCTTTCGGAACCGTCTATGAAGGCTTCACTGATGAGGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTACTCAGGGAAAACAGAGCATTTCCCAGCTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCGGACAAGGACAAAAGTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTAGCAAGTCTCTACCAAAAGTATCTTTTAAACGATTCCCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGAACATAATGTGGTTCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGGCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATGTGAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTTAACTTAAAGGACCAAGGTGGTTATGGGTTAGCCGCCGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACACGCCAACCTCCTTATTCGGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGCAAGGGTGTACCTCCACGTATTCCGGATAATTTATCTAAGGATGCCCGAGATTTCATCCTTGATTGCTTACAAGTTAACCCAAACGAACGTCCAACGGCAGCTCGGCTATTGGATCATCCATTTCTAAGGAGAACATTACTGTCTCCCTTAAGTTTTGCTTCTCCACAAAGGAATATGTATCGGTCATAA	1470	0.4966	MDWRRRTKKQAQAQPRLERLNAKKGFNYQPPPSPPSPSSTHLDRQTSFRLFGIDGEFDRIFQTLGLTGPEDFSIPAADWEARKARVASSNAAGPTTTSHALIRPSPEIHPLSVTATTAATLQGDVVSVRDSVLGSSPWSSGEHDAGRGSVGRLRNGERSVLFTDSGSFTTSHDDDSDIGGERVYSVSNSAAPDELAVPYVSSFSFEWFRQTFSSWQKGDVLGNGSFGTVYEGFTDEGFFFAVKEVSLLDEGTQGKQSISQLQQEISLLSKFEHKNIVRYYGSDKDKSKLYIFLELMSKGSLASLYQKYLLNDSQVSAYTRQILCGLKYLHEHNVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVRSSKGSPYWMAPEVVNLKDQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGKGVPPRIPDNLSKDARDFILDCLQVNPNERPTAARLLDHPFLRRTLLSPLSFASPQRNMYRS*	490

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g03071	489	SUPERFAMILY	Protein kinase-like (PK-like)	195	481	IPR011009	-
	Phac2g03071	489	MobiDBLite	consensus disorder prediction	1	43	-	-
	Phac2g03071	489	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	334	346	IPR008271	GO:0004672\|GO:0006468
	Phac2g03071	489	Pfam	Protein kinase domain	216	469	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03071	489	SMART	serkin_6	215	469	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03071	489	ProSitePatterns	Protein kinases ATP-binding region signature.	221	243	IPR017441	GO:0005524
	Phac2g03071	489	FunFam	Mitogen-activated protein kinase 1, putative, expressed	213	482	-	-
	Phac2g03071	489	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	135	473	-	-
	Phac2g03071	489	ProSiteProfiles	Protein kinase domain profile.	215	469	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac2g03071	489	Gene3D	Transferase(Phosphotransferase) domain 1	213	486	-	-
	Phac2g03071	489	PRINTS	Tyrosine kinase catalytic domain signature	395	417	IPR001245	GO:0004672\|GO:0006468
	Phac2g03071	489	PRINTS	Tyrosine kinase catalytic domain signature	328	346	IPR001245	GO:0004672\|GO:0006468
	Phac2g03071	489	PRINTS	Tyrosine kinase catalytic domain signature	293	306	IPR001245	GO:0004672\|GO:0006468
	Phac2g03071	489	PRINTS	Tyrosine kinase catalytic domain signature	438	460	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g03071	Phac-Chr2	32451161	32456694	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g03071	4	88	MAP Kinase Kinase Kinase	AT4G08500	34.694	5.10e-07	50.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Phac2g03071		Pkinase	6.2e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g03071	-		K13414	gmx:100820552	742.651