Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03048 ATGAAAATTCAGTGCGAGAATGGACATATTGCTTGCTCTAATTGTTGTGTCAGACTCAATAACAAGTGTCCCATGTGTTTGATGCCCATTGGGTATAACCGTTGTCGGGCTATTGAGAAGGTGTTGGACTCTATTAAAATGTCATGCCCGAATGCAAATTATGGCTGCACTGAGACATTTTGTTACAGCAAGAAAAACGACCATGAGAAGGAATGCATCTGTCTACCATGTTTATGCCCACATACTGGTTGTGATTTTGTTGCCTCGTCCAAGGAGTTATTCCTCCACGTCAGCCACAGACATGTAGACTCTGCAACACAGTTTACATACGATAAATTTTTTACAGTCATCTTTAGTGCTGACCAGAAAACAATTGTTCTTCAAGAGAAAAATGATGGTAATCTATTTATTGTTCACAATAACCATGAGACTCTGGGACATAAAGTCCGTATTAGTTGCATTGGTCCCAAGTCCATGGGAGAGTTTCAGTATGAAGTTTTGGCTAGGTTTCGAGGAAGCACTCTAATATTGCAATCTTTTACCAAGATCATTCAAAGACAATACGCTGATGCTCCTTCAAATGCGTTCCTTTTGATTCCTTCTGGATTTTTTGGCCCTCTACAACTGAAACTGGACATTCGCATTAAGTCACATTAA 657 0.3973 MKIQCENGHIACSNCCVRLNNKCPMCLMPIGYNRCRAIEKVLDSIKMSCPNANYGCTETFCYSKKNDHEKECICLPCLCPHTGCDFVASSKELFLHVSHRHVDSATQFTYDKFFTVIFSADQKTIVLQEKNDGNLFIVHNNHETLGHKVRISCIGPKSMGEFQYEVLARFRGSTLILQSFTKIIQRQYADAPSNAFLLIPSGFFGPLQLKLDIRIKSH* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03048 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 97 IPR013083 -
Phac2g03048 218 ProSiteProfiles Zinc finger SIAH-type profile. 44 102 IPR013010 GO:0008270
Phac2g03048 218 Pfam Seven in absentia protein family 34 190 IPR018121 GO:0005737|GO:0006511|GO:0007275
Phac2g03048 218 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 3 217 IPR044286 -
Phac2g03048 218 SUPERFAMILY TRAF domain-like 44 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03048 Phac-Chr2 32260869 32265051 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03048 4 101 C3H Transcription Factor Family AT2G41980 38.000 9.34e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03048 K04506 - gmx:100778869 373.244