Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03009 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCCGCAGGGCACAGGAGCAGGAGGAGGAGGAGGATCTGACATGTACGAAAAGCACTTTTCCTCTTCCTTAATCCCTGCAGGTTCAACACCATATGATTCACAACCCTTTGATCCCTCCTACATGACCTTCACTGACTGTTTGCAAGGGGCCATGGACTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCCTCATCCGAGGTTTTCTCATCTGTTGAAGGAAACCACAAGCCTGCAGAAGGAGGAGATGGAGGTGTTGGCAGTGGTGGAAGTGAAACCCTTGCGACCCTTAACTCATCTATCTCTTCTTCATCTTCTGAGGCTGGGGCTGAAGAAGATTCAGGAAAGAGCAAAAAGGATAGGCAGGTGAAACCAGAAGAAGGAGGAGAAGGAGAAAACTCTAAGAAAGGGCACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCTGTTACTACCACCACCACTACTGTTACAACTGCTGCCACTCCTCCCTCCATTTACTCTTCCTATAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCTGAATATGGTCTCCTTCAAGACATAGTCCCTTCCATGTTCCAGAACAAGACACACCCCCAGAATTAA 1077 0.4754 MSVEPKELYYQDLVLDHNNPQGTGAGGGGGSDMYEKHFSSSLIPAGSTPYDSQPFDPSYMTFTDCLQGAMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGVGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKPEEGGEGENSKKGHKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHHHPHHHFHNTLFSTQSTNAVTTTTTTVTTAATPPSIYSSYNINNSLLHNQYLPSEYGLLQDIVPSMFQNKTHPQN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03009 358 MobiDBLite consensus disorder prediction 17 37 - -
Phac2g03009 358 SUPERFAMILY WRKY DNA-binding domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g03009 358 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g03009 358 MobiDBLite consensus disorder prediction 83 173 - -
Phac2g03009 358 FunFam WRKY transcription factor 57 170 244 - -
Phac2g03009 358 Gene3D WRKY domain 168 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g03009 358 MobiDBLite consensus disorder prediction 111 130 - -
Phac2g03009 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 287 IPR044810 GO:0003700
Phac2g03009 358 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g03009 358 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g03009 358 MobiDBLite consensus disorder prediction 131 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03009 Phac-Chr2 31853727 31855955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03009 55 350 WRKY Transcription Factor Family AT4G18170 50.495 2.06e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g03009 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03009 - - gmx:100816891 483.026