Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02984 ATGGTGAAAAAGGCAAAAGGGTCTCACTCTACTTCTTCGGCCTCTGCCTCTGCGGCTTCTGGTAATCTAGTTTTGAGGATTAAATCAAATGAGGGAATCAAGAGATCGGTGCGGCAGACCAATTCAAGAAAGAAACCCAAAGCAAAACTAAAGAAGAACAAGCGGAAGTTTGATACTATGAAACCGAAGAAACCTCCTACAGCTTTCTTCTACTTCTTGGAGGATTTCCGTAAAGAATTTCAAGAGAAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGATGGCTATTAGGATTCTATGGCAAGCTGGTTTCAGTCCCATGTTGAAGGCCAAGGACATTGGAGGAATTGGTCGAAAGGGATCTCATGGAGAAGGTTCAATACTACGATGTAGCTACAGAAAAGCGTGCAGAATTTGA 459 0.4227 MVKKAKGSHSTSSASASAASGNLVLRIKSNEGIKRSVRQTNSRKKPKAKLKKNKRKFDTMKPKKPPTAFFYFLEDFRKEFQEKNPDVKSMRDIGKACGEKWKTMTYEMAIRILWQAGFSPMLKAKDIGGIGRKGSHGEGSILRCSYRKACRI* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02984 152 SUPERFAMILY HMG-box 47 107 IPR036910 -
Phac2g02984 152 SMART hmgende2 61 126 IPR009071 -
Phac2g02984 152 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 62 105 IPR009071 -
Phac2g02984 152 MobiDBLite consensus disorder prediction 39 59 - -
Phac2g02984 152 Pfam HMG (high mobility group) box 62 106 IPR009071 -
Phac2g02984 152 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 36 107 IPR031061 -
Phac2g02984 152 MobiDBLite consensus disorder prediction 30 62 - -
Phac2g02984 152 Gene3D High mobility group box domain 60 118 IPR036910 -
Phac2g02984 152 CDD HMG-box_AtHMGB1-like 63 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02984 Phac-Chr2 31628178 31634472 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Phac2g02984 HMG_box 1.3e-11 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02984 - - vum:124844238 177.563