Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02922 ATGGAGATGAGTATGTTGGCTCCTTCTTTCCCTGGCTTCGCAAAACCCTCTGCAAGTGTAAAACCTTCTCTTCTCACTCTCAGGGCATCTTCTCTGCGCCATGACTACCCTCTTGCGAGCAAAGTTGTTGTTAAAAATTTACCATATTCTACTGGTGAGACTACTTTGCGAAAGGAATTTTCTAATTTTGGCAAGATAGCTGAAGTTAAAATGGTTAAAGATATGAACACAAAAAGATCTAAGGGTATTGCTTTCATTCAATATACATGCCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTCGAACAATCTATGTGGAAATTGCTAGACTGGGTTGGGATTATTTTGGTGCAACACCAAGGGCCTCAGGACCCCCAACCCCAAAGAAGTGGGATTTGCCAGAGCAAGAAGAAGTGGTAGATTGTTGGTACTGA 456 0.4189 MEMSMLAPSFPGFAKPSASVKPSLLTLRASSLRHDYPLASKVVVKNLPYSTGETTLRKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIYVEIARLGWDYFGATPRASGPPTPKKWDLPEQEEVVDCWY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02922 151 FunFam glycine-rich RNA-binding protein 4, mitochondrial 28 145 - -
Phac2g02922 151 SMART rrm1_1 41 114 IPR000504 GO:0003723
Phac2g02922 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 111 IPR000504 GO:0003723
Phac2g02922 151 SUPERFAMILY RNA-binding domain, RBD 26 121 IPR035979 GO:0003676
Phac2g02922 151 CDD RRM_SF 42 114 - -
Phac2g02922 151 Gene3D - 28 141 IPR012677 -
Phac2g02922 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Phac2g02922 151 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 34 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02922 40 121 Eukaryotic Initiation Factors Gene Family AT2G36660 35.366 5.13e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02922 - - pvu:PHAVU_002G189500g 303.138