Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02918 ATGTTTCTCACTTTCTTTATTACTCATCAAAGTTCATCATCACTTGATCACTTCATCACCATGGCTCAAACTCAGGCTGAGTCTCCAACACCTTCCTCCTTTGGCCCCATCATAAGCACACCATGTGATGAGCAAGTTGGTGGGTTTGACTGGATGGTCCTTGTGGCAGCCATTCTATGTGCCTTAGTGTGTGCTCTTGGCCTCAACACTATGTTGCAATGTGTCTTCCAATGTGCTTCTCGTCTCCTCACACAACCTCGCCAATGGATGGCTTCTCGCAGACTCAATTCTGGTCTCAAGAGGAAGGAAATGGTTGCTTTGCCAACTTCAACCTACACACACTCTGCCTCTTCATCTTCTCCTTCTACTTCATCTTCTACCTGTGTCATCTGCTTGGCTGAGTTCTCTGATGGAGACCCTATAAGGTTCCTCCCAAACTGCAACCACCATTTCCATGTTCTCTGCATTGACAAGTGGCTCCTCTCTCACTCTTCTTGCCCTACTTGCAGGCACCTACTCAACCCTAATCATCATCATCTTCAATCCTTACATATTAATCTCATAGCTTAG 570 0.4596 MFLTFFITHQSSSSLDHFITMAQTQAESPTPSSFGPIISTPCDEQVGGFDWMVLVAAILCALVCALGLNTMLQCVFQCASRLLTQPRQWMASRRLNSGLKRKEMVALPTSTYTHSASSSSPSTSSSTCVICLAEFSDGDPIRFLPNCNHHFHVLCIDKWLLSHSSCPTCRHLLNPNHHHLQSLHINLIA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02918 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 175 IPR013083 -
Phac2g02918 189 SUPERFAMILY RING/U-box 127 176 - -
Phac2g02918 189 PANTHER RING-H2 FINGER PROTEIN ATL78 21 175 IPR044602 GO:0016567|GO:0016740
Phac2g02918 189 CDD RING-H2_EL5-like 128 170 - -
Phac2g02918 189 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Phac2g02918 189 Pfam Ring finger domain 127 170 IPR001841 -
Phac2g02918 189 SMART ring_2 128 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02918 Phac-Chr2 30961671 30962391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02918 41 175 C3H Transcription Factor Family AT2G17450 42.254 9.25e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02918 - K19040 gmx:100779286 233.032