Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02904 ATGTTAGAGACACCTACAGCAAAACAAGATTCAAATGATCAAAATTTAAACATCTTTTTCAGTGAATGCTCAAATTCTGAGAGACCAATGAGTACAGGAGACAGGGCAAAAATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGGAGAAAGCATACCCTCTCTAAAGGATAACTTCCCTCAAACTCTTCCAGACCCTCTACCTCCATCACCTATGGTTGCAGGCAACACCACAAACACTGATAATGGCCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAGCTCTCCTTTAACCATCCTAATCTACAACACCAAGATGTCTCCATCTATGCAAGTGGAGTCACTGCCACATGTATTGACATCCCTCATTCACAGCATCTAGGTTTGAACATGGGGAACTCCTACATCAACAACACCAACAACATGGATAACCATTTGGTGCAAGAGGTCATTGATTCCCTTCCCTATCAGCAGTCCACTTGGGACCCCACTACTGTTCAGGAATTGCAAGACATAGCCTATGCTAATCAAATAGAACAGCAACAGCAACAAAATGAACAACAATTTCAGCAAATGGAGACTCAAAACTGCAGCCAAAGCTACAACCCCTCTTCCATACTAGACCCTCCTTACACTTCACCAGATCTCCTAAACCTTCTCCACTTACCAAGATGCTCAGCCTCATCTTTGCACACCAATCCCACCATTTGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAATCCACTGGCATTTCTTGGAGACCTTCCAATAGGGTCAGACAACACAAATGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCTTCCTCCACAACCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTCCCTCGTGGCTACAGCTTGCCAACCAACTCAAGGAATGGTTCACTCTTTGGAGGGGATGAGATAGAGGGAGATGGGAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACCCTCTGTTAGCAAGGGAAGAGGAGGAAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGAAAATACAAAATCTTGAGAAATCTTATCCCAAACCCCACCAAGATTGATAGAGCATCCGTGGTGGGGGATGCCATTGACTACATAAGAGAGCTGATTAGAACAGTGAATGAACTCAAACTATTGGTAGAGAAGAAAAGGTATGGGAGAGAGAGGTGCAAAAGGCCCAAAACAGAAGAAGATGCTGCTGAGAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAGGTTGATGTCCGGATTATAGATGATGATGTCACAATCAAACTCTTCCAGAGGAAGAAAATCAACTGTCTGTTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGTTGGAGCTTCATCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTATTCAATAGCAAGATAATTGAAGGTTCCTCAGTCTATGCAAGTGCCATAGCCAACAGGGTCATCGATGTTTTGGACTGTCAGTACACAGCATCAGTTCCTCATACAAACAGCTACTAG 1629 0.4426 MLETPTAKQDSNDQNLNIFFSECSNSERPMSTGDRAKMHEQTGCFDPNTMGESIPSLKDNFPQTLPDPLPPSPMVAGNTTNTDNGLEENLRLSVEELSFNHPNLQHQDVSIYASGVTATCIDIPHSQHLGLNMGNSYINNTNNMDNHLVQEVIDSLPYQQSTWDPTTVQELQDIAYANQIEQQQQQNEQQFQQMETQNCSQSYNPSSILDPPYTSPDLLNLLHLPRCSASSLHTNPTICLTNPTQNTPNFQNPLAFLGDLPIGSDNTNASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFGGDEIEGDGSQLDMGVLEFNRVTPSVSKGRGGKATKHFATEKQRREQLNGKYKILRNLIPNPTKIDRASVVGDAIDYIRELIRTVNELKLLVEKKRYGRERCKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVLDCQYTASVPHTNSY* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02904 542 Pfam Helix-loop-helix DNA-binding domain 347 393 IPR011598 GO:0046983
Phac2g02904 542 SMART finulus 350 399 IPR011598 GO:0046983
Phac2g02904 542 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 410 IPR036638 GO:0046983
Phac2g02904 542 Gene3D - 342 415 IPR036638 GO:0046983
Phac2g02904 542 PANTHER TRANSCRIPTION FACTOR BHLH91 37 534 IPR045895 GO:0006355|GO:0048658
Phac2g02904 542 Coils Coil 177 197 - -
Phac2g02904 542 CDD bHLH_AtMYC1_like 349 413 IPR045896 -
Phac2g02904 542 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 393 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02904 Phac-Chr2 30839279 30841635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02904 38 540 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.594 1.84e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02904 HLH 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02904 - - gmx:100801349 856.284