Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02903 ATGAGTACAGGAGACAGGGCAAAAATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGGAGAAAGCATACCCTCTCTAAAGGATAACTTCCCTCAAACTCTTCCAGACCCTCTACCTCCATCACCTATGGTTGCAGGCAACACCACAAACACTGATAATGGCCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAGCTCTCCTTTAACCATCCTAATCTACAACACCAAGATGTCTCCATCTATGCAAGTGGAGTCACTGCCACATGTATTGACATCCCTCATTCACAGCATCTAGGTTTGAACATGGGGAACTCCTACATCAACAACACCAACAACATGGATAACCATTTGGTGCAAGAGGTCATTGATTCCCTTCCCTATCAGCAGTCCACTTGGGACCCCACTACTGTTCAGGAATTGCAAGACATAGCCTATGCTAATCAAATAGAACAGCAACAGCAACAAAATGAACAACAATTTCAGCAAATGGAGACTCAAAACTGCAGCCAAAGCTACAACCCCTCTTCCATACTAGACCCTCCTTACACTTCACCAGATCTCCTAAACCTTCTCCACTTACCAAGATGCTCAGCCTCATCTTTGCACACCAATCCCACCATTTGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAATCCACTGGCATTTCTTGGAGACCTTCCAATAGGGTCAGACAACACAAATGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCTTCCTCCACAACCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTCCCTCGTGGCTACAGCTTGCCAACCAACTCAAGGAATGGTTCACTCTTTGGAGGGGATGAGATAGAGGGAGATGGGAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACCCTCTGTTAGCAAGGGAAGAGGAGGAAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGAAAATACAAAATCTTGAGAAATCTTATCCCAAACCCCACCAAGATTGATAGAGCATCCGTGGTGGGGGATGCCATTGACTACATAAGAGAGCTGATTAGAACAGTGAATGAACTCAAACTATTGGTAGAGAAGAAAAGGTATGGGAGAGAGAGGTGCAAAAGGCCCAAAACAGAAGAAGATGCTGCTGAGAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAGGTTGATGTCCGGATTATAGATGATGATGTCACAATCAAACTCTTCCAGAGGAAGAAAATCAACTGTCTGTTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGTTGGAGCTTCATCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTATTCAATAGCAAGATAATTGAAGGTTCCTCAGTCTATGCAAGTGCCATAGCCAACAGGGTCATCGATGTTTTGGACTGTCAGTACACAGCATCAGTTCCTCATACAAACAGCTACTAG 1542 0.4494 MSTGDRAKMHEQTGCFDPNTMGESIPSLKDNFPQTLPDPLPPSPMVAGNTTNTDNGLEENLRLSVEELSFNHPNLQHQDVSIYASGVTATCIDIPHSQHLGLNMGNSYINNTNNMDNHLVQEVIDSLPYQQSTWDPTTVQELQDIAYANQIEQQQQQNEQQFQQMETQNCSQSYNPSSILDPPYTSPDLLNLLHLPRCSASSLHTNPTICLTNPTQNTPNFQNPLAFLGDLPIGSDNTNASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFGGDEIEGDGSQLDMGVLEFNRVTPSVSKGRGGKATKHFATEKQRREQLNGKYKILRNLIPNPTKIDRASVVGDAIDYIRELIRTVNELKLLVEKKRYGRERCKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVLDCQYTASVPHTNSY* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02903 513 MobiDBLite consensus disorder prediction 307 326 - -
Phac2g02903 513 Pfam Helix-loop-helix DNA-binding domain 318 364 IPR011598 GO:0046983
Phac2g02903 513 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 364 IPR011598 GO:0046983
Phac2g02903 513 MobiDBLite consensus disorder prediction 17 31 - -
Phac2g02903 513 MobiDBLite consensus disorder prediction 1 33 - -
Phac2g02903 513 CDD bHLH_AtMYC1_like 320 384 IPR045896 -
Phac2g02903 513 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 381 IPR036638 GO:0046983
Phac2g02903 513 PANTHER TRANSCRIPTION FACTOR BHLH91 8 505 IPR045895 GO:0006355|GO:0048658
Phac2g02903 513 Gene3D - 313 386 IPR036638 GO:0046983
Phac2g02903 513 Coils Coil 148 168 - -
Phac2g02903 513 SMART finulus 321 370 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02903 Phac-Chr2 30839134 30841635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02903 9 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.594 7.25e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g02903 HLH 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02903 - - gmx:100801349 856.284