Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02902 ATGAGTAGTTCAAAGTTGAGTGAGTCAGATCATGGTGAAGAAAGTATTTTCCATTGCCGTCATCGTCATGATCCAGAAATAATAGCTAGACTCGAAGAAATCTTCAAAGAATGCTCACATCCGGACGAAACACGTCGCCGTCAAATAGGAGAGGAGCTTGGGCTTGATGCTAAACAAGTAAAATTTTGGTTTCAGAACAAGAAAACACAATTAAGGACTAAAAGTGAGCGATTAGATATCGATGCTCTTCGTCTTGAGAATGAAAGAATACAAACAGAAAACCGTATAATGAGTGAGACTTTGAAGAGTGTAGCATGCGCACCTTGTGGGGGTCGATCCATGGGACAAGAAGAGCGAGAACTTTCTTTGCAAATCTTGAAGGTAGAAAATATTCTATTAATCAAAGAGTGTGAGAGAGTAATCTCATTCATGGCAAACAATGGGATTGATCCACAACTACTTCCTGCTTTTCCTTCTTCTTCTTCTTCTTCACTTGATACCTTACGAGCAAGTTTGATGGTTGGAACTTCACAAAATCCACTCATTCTTGATGAGGATCCTCACATTCCTTCCCCTGCTCAACATAATATTCCAGCAGTTAATCAACATGTTCCTACTGCTACATCAACCCTTTCTCAGGATATTCCTATTCCTATTCTTAATCATGGCCATAGTCAACAAATTCCTGCTCCTGCACTTGTTCAACATGTTTCTTCTCTTACTGCTACTTCTCCTGCCATTCTTGATCCCTTTCCCAGTCAAGATGATTCTCTTTTGATTTCATGTCTTGAGTATAATATTCCAGCTTTGGTTACTGCTCTTGATCAAAATATTCACACACTGGCTTCTACTCATAATCAAAATAACAATTACGTTCCCGCTGCTGAGGAACAAAGCCGATTGCAAGGACCAAATCCATGTTTAAGCGTTCCTTCTGTTACTCCTACCCTAAATCAAGATATTCCACCTCCTTGTCAAGACATTTCGTCCATTCTTCAGGATCATACGCCATCTCTTGATCTTGATCTGGATGGGATACTTAAAATTTTGAACAGCGATAGGGTATCACAACCGACGAGCAGCGAAAATAAAGATACGGAAAAGGCACGAATGTTGAAGATTGCGAATACTGCGATGGAAGAGTTGATGAAACTCTTAAGTATGAACGAACCCTTCTGGTTCAGGTCTATTGTGGATGGGAGATTCATTCTGCAGCGTGATTGCTACCAAAGGATTTTTCGAAGGAGTAATACCTTAAACGGACCTCATGCTCGAGTAGAGTCTTCGAAAGATTCACGAGTGGTGAAAATGAGTGGGAAAGAGCTTGTGGAAATGTTTTTAAATTCGGAGAAATGGGTTGATCTATTCCCAACAATTGTTAAAAAAGCCCAAACAATTGAAGTACTCGAGAGTGGTTCGTTAGGAAACCGAAATGGAGCTTTGCAGTTGATGAATGCAGAAATGCACACTCTTTCACCTTTGGTTCCAACTCGGGAATTCCACTTCCTTCGTTATTGTAAACAAATTGAAGCAGGTGTATGGACCATAGGGGATGTGTCAGTTGATTCTTCGACACACAAAACCTCTACTGTTTCTACCACTCGGAGGCTCCCATCTGGATTGTTGATTCAAGAAATCACTGAGGGATTGTGCAGGGTTTCTTGGGTGGAGCATGTGGAAGTGGATGATAAGATCCAAACTCACAATCTTTTCAGAGACCTTATTTGTGGCAATAATGCATATGGAGCAGAAAGATGGGTTTTGGCACTTGAAAGAATGTGTGAGAGGATTGCAAGTGCCTCAAGTGAAACTATACCTAGTTATGAAGCTGGAGGAGTGATTAGGTCAGCTGAGTCAAGAAGGAATATAATGCGCCTGACTCGTCGTATGGTTAAGTGTTACTGTGAGAGTTTGTGTATGCAAGATAACACGAGCTTCCCACACCTAACCAGGATGACCAATTCTGGTGTTAGAGTTGCCGTTCGAGTGAACATGAGCGAGCCTAGTGAACCTAAAGGCATGATTCTCAGTGCAGCTACCTCCTTTTGGCTTCCTCTCTCTCCACAACATGTTTTTGACTACTTGATAGATGATAGGAAACGAGCTAAGTGGGATGTTCTCTGCTCTGGAAACGCAGGGCACGAAATTCAACGCATCACAACAGGTAGTAATCCTGGAAACTGTATTTCAATCATGCGGCCTTTCATCCCTAAAGAGAACAACATAGTGGTTCTCCAAGAAAGTTATGTAGATGCTTTGGGATGTGTGATGTTGTACTCTCCTTTTGACATGAAGGCATTGAACTACGTGATGAACGGAAAAGACACGTCATTGTTTCCGATTCTTCCGTCTGGCTTTACCATATCTAGGGATGGGAAAGTAAATGTTCCTGAAGGAGAATCTAGAGAAATTGGGAAATCGGGAGGTTCCTTGGTGACTCTAATGTTTCAAGTTTTGGCTTCTAGTCCATCTAGAATGAGCATGGTAGACATCGAAGTTGTAGGTAACGTTAATGCACTTGTCACCTCAACAATAGAGAATATTAAAGATGCTTTGAATTGTTTAGATTCAAAGTAA 2577 0.4121 MSSSKLSESDHGEESIFHCRHRHDPEIIARLEEIFKECSHPDETRRRQIGEELGLDAKQVKFWFQNKKTQLRTKSERLDIDALRLENERIQTENRIMSETLKSVACAPCGGRSMGQEERELSLQILKVENILLIKECERVISFMANNGIDPQLLPAFPSSSSSSLDTLRASLMVGTSQNPLILDEDPHIPSPAQHNIPAVNQHVPTATSTLSQDIPIPILNHGHSQQIPAPALVQHVSSLTATSPAILDPFPSQDDSLLISCLEYNIPALVTALDQNIHTLASTHNQNNNYVPAAEEQSRLQGPNPCLSVPSVTPTLNQDIPPPCQDISSILQDHTPSLDLDLDGILKILNSDRVSQPTSSENKDTEKARMLKIANTAMEELMKLLSMNEPFWFRSIVDGRFILQRDCYQRIFRRSNTLNGPHARVESSKDSRVVKMSGKELVEMFLNSEKWVDLFPTIVKKAQTIEVLESGSLGNRNGALQLMNAEMHTLSPLVPTREFHFLRYCKQIEAGVWTIGDVSVDSSTHKTSTVSTTRRLPSGLLIQEITEGLCRVSWVEHVEVDDKIQTHNLFRDLICGNNAYGAERWVLALERMCERIASASSETIPSYEAGGVIRSAESRRNIMRLTRRMVKCYCESLCMQDNTSFPHLTRMTNSGVRVAVRVNMSEPSEPKGMILSAATSFWLPLSPQHVFDYLIDDRKRAKWDVLCSGNAGHEIQRITTGSNPGNCISIMRPFIPKENNIVVLQESYVDALGCVMLYSPFDMKALNYVMNGKDTSLFPILPSGFTISRDGKVNVPEGESREIGKSGGSLVTLMFQVLASSPSRMSMVDIEVVGNVNALVTSTIENIKDALNCLDSK* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02902 858 SMART HOX_1 16 78 IPR001356 GO:0003677
Phac2g02902 858 Pfam START domain 374 596 IPR002913 GO:0008289
Phac2g02902 858 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 853 IPR042160 -
Phac2g02902 858 Coils Coil 68 100 - -
Phac2g02902 858 Gene3D - 7 85 - -
Phac2g02902 858 CDD START_ArGLABRA2_like 368 595 - -
Phac2g02902 858 SUPERFAMILY Bet v1-like 366 598 - -
Phac2g02902 858 SUPERFAMILY Bet v1-like 652 841 - -
Phac2g02902 858 ProSiteProfiles 'Homeobox' domain profile. 20 74 IPR001356 GO:0003677
Phac2g02902 858 SMART START_1 373 596 IPR002913 GO:0008289
Phac2g02902 858 Pfam Homeodomain 20 72 IPR001356 GO:0003677
Phac2g02902 858 Gene3D - 373 573 IPR023393 -
Phac2g02902 858 ProSiteProfiles START domain profile. 364 599 IPR002913 GO:0008289
Phac2g02902 858 CDD homeodomain 20 75 IPR001356 GO:0003677
Phac2g02902 858 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02902 Phac-Chr2 30820861 30830105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02902 335 854 Homeobox Transcription Factor Family AT1G17920 43.233 1.70e-131 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac2g02902 START 2.2e-37 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02902 K09338 - gmx:100783586 935.25