Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02885 ATGAACTGGGTTCGTGGAGACTCACTCGGCCATGGAGCCTTCGCCACCGTCAACGTTGTCGTGCCTGCAACCGGCTCCACTTTTTTCCCTTCTCCAGCCGCCGTCAAATCCTCTGTTTCCCACAACGCGGGTTTGCTAAAAAACGAAAAGGAGATACTCTATCGCCTTGGCTCTTCCCCTTACATCATCAACTGTTTCGGCCACGATCACACCGTCGAGAACGGCGAGGAGTTCTACAACGTCTTCCTCGAACAGGCCGCCGGAGGCTCCCTCGCCGATCAGGTCAAGAAACACGGCGGAAGCCTCCCGGAGCCTTTCGTGCGGCGATGCACAAGGTCCATCGTGGAAGGGCTCAGACATATTCACGACCACGGTTTTGTTCACTGTGACGTGAAGCTTCAAAACGTTCTCGTTTTCGACAACGGCGAGGTGAAAATAGCAGACTTCGGGCTCGCCAAGGAGAAGGGGGAGAAACAGGGCAGGTGCGAGTGCAGGGGAACGCCATTGTTTATGTCACCGGAATTGGTGAATGACAATGAGTGTGAGCCGCCGGCGGACATTTGGGCCCTGGGATGCGCCGTGGTGGAGATGGTGACCGGAAAACCCGCGTGGGAGGTTCGCGAGGGATCGAGTATTTGGTCATTGTTGATTCGGATTGGAGTGGGAGAAGAATTGCCAAAGATTCCAGAAGATTTGTCGGAAGAGGGGAAGGACTTTTTGGGAAAGTGCTTTGTTAAGGATCCCACGAAGAGGTGGAGCGCTGAGATGCTTCTCAAACACCCTTTCATCAAAGTTGACTCATTTTCGTTTGATAAAGTTAATAAGCCGTTACCGCCGCCGTCACCAAGTACCCACTTCGATTTTCCTCACTGGGCTTCCACCGTAACGGCTTCGCTCCCGTCTTCCCCGTATTCCGACGAGTGGTCTGGGTGGTGGTGTTCGCCGGAGAGTCGTCTCCGGCGGCTTGTTACTGATAAGAGACCGGAGAATTGGTCAGAATCGGATGGCTGGATGAGCGTTAGGTGA 1026 0.5419 MNWVRGDSLGHGAFATVNVVVPATGSTFFPSPAAVKSSVSHNAGLLKNEKEILYRLGSSPYIINCFGHDHTVENGEEFYNVFLEQAAGGSLADQVKKHGGSLPEPFVRRCTRSIVEGLRHIHDHGFVHCDVKLQNVLVFDNGEVKIADFGLAKEKGEKQGRCECRGTPLFMSPELVNDNECEPPADIWALGCAVVEMVTGKPAWEVREGSSIWSLLIRIGVGEELPKIPEDLSEEGKDFLGKCFVKDPTKRWSAEMLLKHPFIKVDSFSFDKVNKPLPPPSPSTHFDFPHWASTVTASLPSSPYSDEWSGWWCSPESRLRRLVTDKRPENWSESDGWMSVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02885 341 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02885 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Phac2g02885 341 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Phac2g02885 341 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02885 341 CDD STKc_MAPKKK 2 263 - -
Phac2g02885 341 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 300 - -
Phac2g02885 341 Gene3D Transferase(Phosphotransferase) domain 1 2 284 - -
Phac2g02885 341 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02885 341 SUPERFAMILY Protein kinase-like (PK-like) 3 308 IPR011009 -
Phac2g02885 341 FunFam Mitogen-activated protein kinase kinase kinase 17 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02885 Phac-Chr2 30684302 30685327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02885 1 341 MAP Kinase Kinase Kinase AT3G50310 51.841 1.20e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac2g02885 Pkinase 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02885 - - gmx:100797177 552.362