Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02878 ATGGTTTTTCCAAAACCTTCTTCTGAGTCTGACCTCTTTCTTCATTCCAACTTCGCCTCTTCTTATGCCGGAGACTCTCTTCCCAGGTTCAGCATGCCCGAGAACTCCATGCCTAAAGATGCTGCTTACCAAAACATACACGATGAGTTGCAGCTTGATGCTATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAGCTCATCATGGAATCTATCAACAAGAACTATGTAGACATGGATGAGTATCCTGCAACCACTGACCTTCATAACCGGTGCCTGAACATGATAGCACGTTTGTTCCATGCTGAACTTGGAGAAAATGAGAATGCAGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTAGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAGGCGCAAGGCAGAGGGCAAGCCTTATGATAAGCCTAATTTGGTTACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCCAGGTATTTTGAAGTGGAGTTGAGGGAAGTGGAGGTGAGAGAAGGCTACTACGTGATGGATCCAGCCAAAGCCGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAGCTCTTAAACGACTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACAGGTATTCATGTGGATGGTGCTAGTGGTGGTTTCATTGCTCCTTTCCTTTATCCAGAGCTTGAGTGGGATTTCAGACTGGAATTGGTGAAGAGCATAAATGTGAGTGGACACAAGTATGGGCTTGTGTATGCTGGTATTGGTTGGGTTATTTGGAGGAACAAGGAGGAGTTGCCCCAAGACCTTATCTTCCATATCAATTACCTTGGAGCTCACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGGTTACCGAAGCATAATGGAGAAGTGCAGAGAAAATGCAAAGGTGGTGAAGGAAAATTTGGAGAAGAGTGGACGCTTTAACATAGTTTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACCGAAGCCAGTACGATGAGTACAAGATATCAGAGATGCTGCGGCGCCATGGTTGGATTGTTCCAGCCTATCCAATGCCACCTGCTGCTCAGCACATAAATGTACTCCGTGTGGTCATAAGGGCTGAGTTTTCACGTACCCTTGCTCAGCGCCTTGCGTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGGTGCAGGCCCCCATAATGACCAATAGCTGTGAAGAAGAGAACAAGGGCTTGGTTGAAACTGGAGTGAAGGAAACTGCATTAGACGCACAAAGAGCAATCATTGTTCAAGAATCCAACAAGCGTCAGAAAATTATGGCTGCCTAG 1482 0.4528 MVFPKPSSESDLFLHSNFASSYAGDSLPRFSMPENSMPKDAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCLNMIARLFHAELGENENAVGAGTVGSSEAIMLAGLAFKKKWQNRRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETGIHVDGASGGFIAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRNKEELPQDLIFHINYLGAHQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMEKCRENAKVVKENLEKSGRFNIVSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLAFDIHNVLHELEKVQAPIMTNSCEEENKGLVETGVKETALDAQRAIIVQESNKRQKIMAA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02878 493 FunFam Glutamate decarboxylase 66 360 - -
Phac2g02878 493 SUPERFAMILY PLP-dependent transferases 17 445 IPR015424 -
Phac2g02878 493 Gene3D - 66 360 IPR015421 GO:0003824
Phac2g02878 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phac2g02878 493 PANTHER GLUTAMATE DECARBOXYLASE 5 484 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac2g02878 493 Gene3D - 1 65 - -
Phac2g02878 493 NCBIfam glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac2g02878 493 FunFam Glutamate decarboxylase 361 448 - -
Phac2g02878 493 FunFam Glutamate decarboxylase 4 65 - -
Phac2g02878 493 Gene3D - 361 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02878 Phac-Chr2 30559988 30579950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02878 1 480 Calmodulin-binding Proteins AT5G17330 73.608 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02878 K01580 - gmx:100782330 902.508