Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g02867 | ATGTTGTTCCTGTGTGCATATGTATTTATTTATGCAGATCCAGATGCTGAGGTTGTGTCTCTCTCACCCACCACCTTGCTGGAATCTGACAGATATGTGTGTGAGATCTGCAACCAAGGGTTCCAGAGGGACCAGAATCTTCAAATGCACAGGAGAAGGCACAAGGTGCCATGGAAATTGCTTAAGAGGGAAACACAAGGGCAGAAGAAGAGAGTATTTGTGTGTCCAGAGCCAAGCTGTTTGCACCATGATCCTTGCCATGCCCTTGGGGATCTTGTGGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAATCACAAGCAGTGGGTCTGTGACAAGTGCTCCAAGGGGTATGCTGTTCAATCTGATTTCAAGGCACACATCAAAACCTGTGGCACCCGGGGTCATTCCTGTGACTGTGGCCGTGTCTTTTCCAGGGTGGAGAGTTTCATAGAACACCAAGATGCATGCACTGTCCGGCAGCACCGGCCAGAGTTGCAAGCACTGCAACCCGCATGCTCTTCTAGAACAGCTTCAAGCGCAAGTCCCTCTAGTGAGGCAAATTTTAGCATAGCCCCACCATTGCAAGGACTTCCACTGCCAAAACTAGCTTCTGCTGATCAACCAGCAACAGTCTTATTGACCTCAGAGATACACAATAACAAGTCCACCACCTCTCGGAACTTAGAACTTCAGCTCTTACCCTCCTCAATAATTTCTCAAGAAAAACGAAATACGAAGGAGAACTATGGTTTGAAACTTTCAATAGGCTCATGTAGTAATGACAAAGGGAATGAAGAGAGAGTATGTTCAGAAGCACATAGGAGCCCACCTGAAAGGAATAATAATGTGAGTGACTGTTCCACATTGGAAGTGGCGAGGTTGAAAAAGTTTGCAGCCGAGGAACTCAAGTTGGCCATGGCAGAAAAGGCTTACGCTGAAGAGGCTAGGAAAGAGGCCAAACGCCAAATTGAGATAGCTGAACTTGAGTTTGAGAATGCCAAAAGGATAAGGAAACAGGCACAATCTGAACTGGCAAAGGCTGAAGTGTTGAGAAAGCAAGCCATCAAGAAGATAAGCTCCACTGTTTTGGAAATAACATGCCAAAGTTGCAAGCAACAGTTCCAGTCTTCAACTCTTGGGGTTCCATCAGAAGAGACCTCCATTGTGGTGAGTTACATGTCATCAGCCACCACAGAAGGAGAAGCAGAATGA | 1215 | 0.4658 | MLFLCAYVFIYADPDAEVVSLSPTTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQGQKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDFKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRQHRPELQALQPACSSRTASSASPSSEANFSIAPPLQGLPLPKLASADQPATVLLTSEIHNNKSTTSRNLELQLLPSSIISQEKRNTKENYGLKLSIGSCSNDKGNEERVCSEAHRSPPERNNNVSDCSTLEVARLKKFAAEELKLAMAEKAYAEEARKEAKRQIEIAELEFENAKRIRKQAQSELAKAEVLRKQAIKKISSTVLEITCQSCKQQFQSSTLGVPSEETSIVVSYMSSATTEGEAE* | 405 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g02867 | 404 | Coils | Coil | 303 | 358 | - | - | |
Phac2g02867 | 404 | Pfam | Zinc finger, C2H2 type | 32 | 54 | IPR013087 | - | |
Phac2g02867 | 404 | Gene3D | Classic Zinc Finger | 94 | 171 | - | - | |
Phac2g02867 | 404 | MobiDBLite | consensus disorder prediction | 170 | 191 | - | - | |
Phac2g02867 | 404 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 12 | 367 | IPR031140 | - | |
Phac2g02867 | 404 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 34 | 54 | IPR013087 | - | |
Phac2g02867 | 404 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 32 | 54 | IPR013087 | - | |
Phac2g02867 | 404 | Gene3D | Classic Zinc Finger | 13 | 75 | - | - | |
Phac2g02867 | 404 | SMART | c2h2final6 | 32 | 54 | IPR013087 | - | |
Phac2g02867 | 404 | SMART | c2h2final6 | 109 | 136 | IPR013087 | - | |
Phac2g02867 | 404 | SMART | c2h2final6 | 73 | 103 | IPR013087 | - | |
Phac2g02867 | 404 | MobiDBLite | consensus disorder prediction | 170 | 193 | - | - | |
Phac2g02867 | 404 | FunFam | protein indeterminate-domain 12-like | 11 | 79 | - | - | |
Phac2g02867 | 404 | SUPERFAMILY | beta-beta-alpha zinc fingers | 31 | 129 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g02867 | Phac-Chr2 | 30280474 | 30283530 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g02867 | 13 | 404 | C2H2 Transcription Factor Family | AT2G01940 | 56.901 | 2.03e-146 | 421 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac2g02867 | zf-C2H2 | 0.0037 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g02867 | K25871 | - | gmx:100791007 | 644.425 |