Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02867 ATGTTGTTCCTGTGTGCATATGTATTTATTTATGCAGATCCAGATGCTGAGGTTGTGTCTCTCTCACCCACCACCTTGCTGGAATCTGACAGATATGTGTGTGAGATCTGCAACCAAGGGTTCCAGAGGGACCAGAATCTTCAAATGCACAGGAGAAGGCACAAGGTGCCATGGAAATTGCTTAAGAGGGAAACACAAGGGCAGAAGAAGAGAGTATTTGTGTGTCCAGAGCCAAGCTGTTTGCACCATGATCCTTGCCATGCCCTTGGGGATCTTGTGGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAATCACAAGCAGTGGGTCTGTGACAAGTGCTCCAAGGGGTATGCTGTTCAATCTGATTTCAAGGCACACATCAAAACCTGTGGCACCCGGGGTCATTCCTGTGACTGTGGCCGTGTCTTTTCCAGGGTGGAGAGTTTCATAGAACACCAAGATGCATGCACTGTCCGGCAGCACCGGCCAGAGTTGCAAGCACTGCAACCCGCATGCTCTTCTAGAACAGCTTCAAGCGCAAGTCCCTCTAGTGAGGCAAATTTTAGCATAGCCCCACCATTGCAAGGACTTCCACTGCCAAAACTAGCTTCTGCTGATCAACCAGCAACAGTCTTATTGACCTCAGAGATACACAATAACAAGTCCACCACCTCTCGGAACTTAGAACTTCAGCTCTTACCCTCCTCAATAATTTCTCAAGAAAAACGAAATACGAAGGAGAACTATGGTTTGAAACTTTCAATAGGCTCATGTAGTAATGACAAAGGGAATGAAGAGAGAGTATGTTCAGAAGCACATAGGAGCCCACCTGAAAGGAATAATAATGTGAGTGACTGTTCCACATTGGAAGTGGCGAGGTTGAAAAAGTTTGCAGCCGAGGAACTCAAGTTGGCCATGGCAGAAAAGGCTTACGCTGAAGAGGCTAGGAAAGAGGCCAAACGCCAAATTGAGATAGCTGAACTTGAGTTTGAGAATGCCAAAAGGATAAGGAAACAGGCACAATCTGAACTGGCAAAGGCTGAAGTGTTGAGAAAGCAAGCCATCAAGAAGATAAGCTCCACTGTTTTGGAAATAACATGCCAAAGTTGCAAGCAACAGTTCCAGTCTTCAACTCTTGGGGTTCCATCAGAAGAGACCTCCATTGTGGTGAGTTACATGTCATCAGCCACCACAGAAGGAGAAGCAGAATGA 1215 0.4658 MLFLCAYVFIYADPDAEVVSLSPTTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQGQKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDFKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRQHRPELQALQPACSSRTASSASPSSEANFSIAPPLQGLPLPKLASADQPATVLLTSEIHNNKSTTSRNLELQLLPSSIISQEKRNTKENYGLKLSIGSCSNDKGNEERVCSEAHRSPPERNNNVSDCSTLEVARLKKFAAEELKLAMAEKAYAEEARKEAKRQIEIAELEFENAKRIRKQAQSELAKAEVLRKQAIKKISSTVLEITCQSCKQQFQSSTLGVPSEETSIVVSYMSSATTEGEAE* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02867 404 Coils Coil 303 358 - -
Phac2g02867 404 Pfam Zinc finger, C2H2 type 32 54 IPR013087 -
Phac2g02867 404 Gene3D Classic Zinc Finger 94 171 - -
Phac2g02867 404 MobiDBLite consensus disorder prediction 170 191 - -
Phac2g02867 404 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 12 367 IPR031140 -
Phac2g02867 404 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Phac2g02867 404 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 54 IPR013087 -
Phac2g02867 404 Gene3D Classic Zinc Finger 13 75 - -
Phac2g02867 404 SMART c2h2final6 32 54 IPR013087 -
Phac2g02867 404 SMART c2h2final6 109 136 IPR013087 -
Phac2g02867 404 SMART c2h2final6 73 103 IPR013087 -
Phac2g02867 404 MobiDBLite consensus disorder prediction 170 193 - -
Phac2g02867 404 FunFam protein indeterminate-domain 12-like 11 79 - -
Phac2g02867 404 SUPERFAMILY beta-beta-alpha zinc fingers 31 129 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02867 Phac-Chr2 30280474 30283530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02867 13 404 C2H2 Transcription Factor Family AT2G01940 56.901 2.03e-146 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02867 zf-C2H2 0.0037 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02867 K25871 - gmx:100791007 644.425