Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02866 ATGTTAGACAACAGTGCTTCTTCTGGTGCACCATCTTCTTCTGATGCCGCCTTTGCATTATCTGAAAATGGGGTGGCTAACAAAAGGAAAAGAAGACCCGCAGGCACACCTGATCCAGATGCTGAGGTTGTGTCTCTCTCACCCACCACCTTGCTGGAATCTGACAGATATGTGTGTGAGATCTGCAACCAAGGGTTCCAGAGGGACCAGAATCTTCAAATGCACAGGAGAAGGCACAAGGTGCCATGGAAATTGCTTAAGAGGGAAACACAAGGGCAGAAGAAGAGAGTATTTGTGTGTCCAGAGCCAAGCTGTTTGCACCATGATCCTTGCCATGCCCTTGGGGATCTTGTGGGCATCAAGAAGCACTTCAGAAGGAAGCACAGCAATCACAAGCAGTGGGTCTGTGACAAGTGCTCCAAGGGGTATGCTGTTCAATCTGATTTCAAGGCACACATCAAAACCTGTGGCACCCGGGGTCATTCCTGTGACTGTGGCCGTGTCTTTTCCAGGGTGGAGAGTTTCATAGAACACCAAGATGCATGCACTGTCCGGCAGCACCGGCCAGAGTTGCAAGCACTGCAACCCGCATGCTCTTCTAGAACAGCTTCAAGCGCAAGTCCCTCTAGTGAGGCAAATTTTAGCATAGCCCCACCATTGCAAGGACTTCCACTGCCAAAACTAGCTTCTGCTGATCAACCAGCAACAGTCTTATTGACCTCAGAGATACACAATAACAAGTCCACCACCTCTCGGAACTTAGAACTTCAGCTCTTACCCTCCTCAATAATTTCTCAAGAAAAACGAAATACGAAGGAGAACTATGGTTTGAAACTTTCAATAGGCTCATGTAGTAATGACAAAGGGAATGAAGAGAGAGTATGTTCAGAAGCACATAGGAGCCCACCTGAAAGGAATAATAATGTGAGTGACTGTTCCACATTGGAAGTGGCGAGGTTGAAAAAGTTTGCAGCCGAGGAACTCAAGTTGGCCATGGCAGAAAAGGCTTACGCTGAAGAGGCTAGGAAAGAGGCCAAACGCCAAATTGAGATAGCTGAACTTGAGTTTGAGAATGCCAAAAGGATAAGGAAACAGGCACAATCTGAACTGGCAAAGGCTGAAGTGTTGAGAAAGCAAGCCATCAAGAAGATAAGCTCCACTGTTTTGGAAATAACATGCCAAAGTTGCAAGCAACAGTTCCAGTCTTCAACTCTTGGGGTTCCATCAGAAGAGACCTCCATTGTGGTGAGTTACATGTCATCAGCCACCACAGAAGGAGAAGCAGAATGA 1290 0.4705 MLDNSASSGAPSSSDAAFALSENGVANKRKRRPAGTPDPDAEVVSLSPTTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQGQKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDFKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRQHRPELQALQPACSSRTASSASPSSEANFSIAPPLQGLPLPKLASADQPATVLLTSEIHNNKSTTSRNLELQLLPSSIISQEKRNTKENYGLKLSIGSCSNDKGNEERVCSEAHRSPPERNNNVSDCSTLEVARLKKFAAEELKLAMAEKAYAEEARKEAKRQIEIAELEFENAKRIRKQAQSELAKAEVLRKQAIKKISSTVLEITCQSCKQQFQSSTLGVPSEETSIVVSYMSSATTEGEAE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02866 429 Gene3D Classic Zinc Finger 35 100 - -
Phac2g02866 429 Gene3D Classic Zinc Finger 119 196 - -
Phac2g02866 429 SUPERFAMILY beta-beta-alpha zinc fingers 56 154 IPR036236 -
Phac2g02866 429 MobiDBLite consensus disorder prediction 1 20 - -
Phac2g02866 429 Coils Coil 328 383 - -
Phac2g02866 429 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Phac2g02866 429 SMART c2h2final6 134 161 IPR013087 -
Phac2g02866 429 SMART c2h2final6 98 128 IPR013087 -
Phac2g02866 429 SMART c2h2final6 57 79 IPR013087 -
Phac2g02866 429 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Phac2g02866 429 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 390 IPR031140 -
Phac2g02866 429 FunFam protein indeterminate-domain 12-like 36 104 - -
Phac2g02866 429 MobiDBLite consensus disorder prediction 195 218 - -
Phac2g02866 429 MobiDBLite consensus disorder prediction 1 45 - -
Phac2g02866 429 MobiDBLite consensus disorder prediction 195 216 - -
Phac2g02866 429 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02866 Phac-Chr2 30280474 30283530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02866 22 429 C2H2 Transcription Factor Family AT2G01940 57.241 7.41e-156 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02866 zf-C2H2 0.004 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02866 K25871 - gmx:100791007 697.967