Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02848 ATGGACAAGGACAAGGACAAGTCTCACACTCACAGCTTTTTTCACAGTTTTGTCAAACACTTCAAATTCGGTTCTAGTAAAGAGCGAAACGATGAAGCTGACATACAGAAAATGGCTGCACAAGAGCAGAAGATTTTTCCCTACGAAACCTTGGCCGCTGTCACCAAGAATTTTAGTGCTATTCACAAGCTAGGCGAGGGAGGTTTTGGACCTGTCTACAAGGGGAAGTTGAATGATGGTAGAGAGATCGCTGTGAAGAAGTTATCACACACTTCAAATCAAGGGAAGAAAGAGTTCATGAACGAGGCGAAGCTATTGGCTCGCGTGCAGCATCGGAATGTGGTGAATTTGGTGGGCTATTGTGTCCATGGCAACGAAAAGCTACTTGTTTACGAGTATGTTGCTCATGAAAGCCTAGACAAGTTTCTTTTCAAATCAGAAAAGAGAGAGAAGCTTGATTGGAAACGTAGGTTGGGCATAATCACAGGAGTTGCAAAAGGGTTGCTTTATCTGCACGAAGACTCACACAATTGCATCATCCATCGTGACATCAAGGCCAGTAATATCTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCCGAAGATCAGTCCCAAGTCAACACACGTGTGGCTGGAACCAATGGATACATGGCTCCGGAATATGTTATGCATGGAAATCTATCGGTGAAGGCAGATGTATTTAGTTATGGAGTTTTGGTATTGGAGTTGATCACCGGTCAAAGAAACTCCTCTTTTAATTTGGATGTGGACGCGCAGAACATGCTTGATTGGGTAACACTCTTTATTTATTATTCTCTCATCACCAAATTTCTTATTCTGGTTGACATTTCCGCAAGTTTTGAGGACTTTTTATTTGATCAATCGTGGTCATGGATTGTATATCTTTTCAGTCTTCACAGAATTAACTCTCCAACCGAACATCACCAAGTTGCATTTAGAATTGATGAAGAGTGGTTTGGTTTTGTGTGGTTATAA 1023 0.4203 MDKDKDKSHTHSFFHSFVKHFKFGSSKERNDEADIQKMAAQEQKIFPYETLAAVTKNFSAIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGNEKLLVYEYVAHESLDKFLFKSEKREKLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLDVDAQNMLDWVTLFIYYSLITKFLILVDISASFEDFLFDQSWSWIVYLFSLHRINSPTEHHQVAFRIDEEWFGFVWL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02848 340 ProSiteProfiles Protein kinase domain profile. 58 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02848 340 SUPERFAMILY Protein kinase-like (PK-like) 39 279 IPR011009 -
Phac2g02848 340 FunFam Cysteine-rich receptor-like protein kinase 10 22 133 - -
Phac2g02848 340 Gene3D Transferase(Phosphotransferase) domain 1 135 290 - -
Phac2g02848 340 SMART serkin_6 58 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g02848 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Phac2g02848 340 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 275 - -
Phac2g02848 340 FunFam Lectin-domain containing receptor kinase A4.3 134 291 - -
Phac2g02848 340 Pfam Protein tyrosine and serine/threonine kinase 61 257 IPR001245 GO:0004672|GO:0006468
Phac2g02848 340 Gene3D Phosphorylase Kinase; domain 1 19 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02848 Phac-Chr2 30048566 30053166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02848 46 271 Receptor kinase-like Gene Family AT4G11530 58.333 4.58e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac2g02848 PK_Tyr_Ser-Thr 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02848 - - gmx:100795769 504.982