Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02840 ATGATGACTCCAAACTTGAACTTGGAACCCGAAAATCATTCAGAAGGAAGTAGCCAGGTGGCTTCCAATGTATCCTTGCATGAAGCATCTTATGATCTTACGAAGGGCAGCACCACCACTTCTTCATGTCTGACAAAGGATGAAACTGATCCAGGTTCTGTTACCCTTGACTTGACACTCAACTTCAATTCCAGTGATAGTGAGTTGAAAGGTTCTAGTGATGCAAGCAGTGAAGTGGGAGCTGAAGCTCCTGCTTCAGCATCAGCAACTCCCAGGGTTTTTTCTTGTAACTACTGCAGGAGGAAGTTCTATAGTTCACAGGCATTAGGGGGTCATCAAAATGCTCACAAAAGGGAGAGGACGATGGCTAAGCGTGCATTGAGAATGGGAATGTTCACTGAGAGATACACAAGTTTGGCATCTCTACCTCTTCATGGTTCACCTTTTAGGTCTCTTGGTCTTGAAGCTCATTCTGCAATGCACCAAAGACACGTCCCATCCTCACTGAGGACTCCTGATATGAGAGCCGCTGCAAGATTTGAGAGAAACCATTTTGGATCACTGGTTTTCATGGAAGATGATGATGTTGGCTTATATTGGCCTGGAAGTTTCAGACAGGTAGACCAAGGAGCTGGTGTTAATGAAGGACATGTTCAAAGTTCAAATGCTAGTGTAGTTCCAATAGTGCCTCCTCCACCACAAGCTTCTGCATCTCCAGATCTCACATTGAAGCTTTAA 738 0.4472 MMTPNLNLEPENHSEGSSQVASNVSLHEASYDLTKGSTTTSSCLTKDETDPGSVTLDLTLNFNSSDSELKGSSDASSEVGAEAPASASATPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRALRMGMFTERYTSLASLPLHGSPFRSLGLEAHSAMHQRHVPSSLRTPDMRAAARFERNHFGSLVFMEDDDVGLYWPGSFRQVDQGAGVNEGHVQSSNASVVPIVPPPPQASASPDLTLKL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02840 245 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Phac2g02840 245 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Phac2g02840 245 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 167 IPR044246 GO:0009788
Phac2g02840 245 MobiDBLite consensus disorder prediction 223 245 - -
Phac2g02840 245 Gene3D Classic Zinc Finger 71 140 - -
Phac2g02840 245 FunFam Zinc finger protein 2 70 140 - -
Phac2g02840 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Phac2g02840 245 MobiDBLite consensus disorder prediction 1 25 - -
Phac2g02840 245 MobiDBLite consensus disorder prediction 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02840 Phac-Chr2 29954777 29958804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02840 88 245 C2H2 Transcription Factor Family AT1G66140 45.161 4.34e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g02840 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02840 - - gmx:100775305 452.21