Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02781 ATGAGCTTTAACTACCATATTCATGACATTGGGATGGGTTTTTTTGCAGGAGAAAAGCGAGTACTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCACTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTAGTATATTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAAGTGGATGGCCATATACCAAATTATCCAAGCTTACCACCACAGCTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACCGAGACCGATGAAGTATATGCACAGATGACTTTACAACCTCTGAGTCCTCAAGAGCAGAAAGAGGCATACCTGCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCAACAAACTACTTTTGCAAAATTCTGACTGCCAGTGACACCAGCACTCATGGGGGATTTTCTGTTCCTCGTAGGGCAGCTGAAAAAGTTTTTCCTCCTTTGGACTTTTCACAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTACATGGTAACGAATGGAAATTCAGACATATCTTCCGAGGTCAGCCCAAAAGGCATTTACTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGCGATTCAGTTCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGCATTCGGCGTGCTAATCGTCCTCAACCTGTGATGCCGTCATCAGTCTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCGACTAATAGTCGTTTCACCATCTTTTATAACCCACGAGCTAGCCCATCAGAATTCGTCATACCTTTAGCAAAGTATGTTAAAGCTGTATATCATACTCGAGTTTCAGTCGGCATGCGCTTTAGGATGCTGTTTGAAACAGAGGAATCCAGTGTTCGTCGATACATGGGCACAATAACTGGCATTAGTGACCTGGATTCTGTTCGGTGGCCAAACTCCCATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACAGCAGGAGAGAGGCAACCCCGGGTGTCTCTTTGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTTCCCCTTAGACTCAAGAGACCATGGCCTCCAGGACTGCCTTCATTCCATGGCTTGAAGGATGATGATTTTGGTATAAATTCTTCACTGATGTGGCTTCGAGACACTGAGAGAGGTCTTCCATCTCTTAATTTTCCGGGGGTTGGTGTTAGTCCTTGGATGCAGCCAAGGCTTGATCCCTCAATGATGAATTATCAAACAGACGTGTACCAAGCTATGGCTGCCGCTGCACTTCAGGATATGTGGACTTCAGATCCTTCTAAACAACATCCTACTTCCTTACTTCAATTTCAGCAACCACAGAACTTCCTGAATAGGAGTTCTCCCTTAGTGCAGACTCAAATCTTGCAGCAGTCTCAATCTCAGCAGTCTTTTCCAAATAGTCAAGAAATACCTCATCCTTCTCAATCTCAGGCTCAAACTCATTTTCAGCAGCATTTGCAGCATCAGCATTCATTCAATAATCAGAATCAGCATCATCTTCTACAGCAGCAACAATCGCAACAACCACAGCAGCAACAACAGCAACTGCAGCAGCAACAACAGCAACTGCAGCAGCAACAAGTGGTTGATCATCAGCAGATTTCAAATGCTGTCTCTACGATGTCTCAGTTTGTTTCAGCACCTCAATCTCAATCGCCACCCATGCAAGCTATCTCTTCACTGGGACATCAGCAGAGTTTTTCTGATTCAAACGGAAACCCTGTGACTAATGCTATTGTTTCTCCCCTGCATAGTATTTTGGGTTCATTTTCCCAGGATGAAACATCTCACCTTCTCAATCTTCCTAGAACCTCTTGGGTTCCTGTTCAACCTTCAACTGCATGGCCGCCCTCCAAACGTGTTGCAGTGGATCCTCTCTTTTCTTCTGGGGCATCTCAATGTGTTCTGCCTCAAGTGGAGCAGTTAGGGCAACCACAGAGTACCATGGCTCAAAATGCAATTACATTGCCACCCTTTCCTAGTAGGGAGTGTGCTATAGAAGGAAGCACTGATCCGCAAAATCATCTTTTGTTTGGAGTAAATATAGAGCCCTCATCACTGCTAATGCATAATGGGTTGTCAAGCCTCAAGGGAGTTAGCAGTAACAGCGGCCCACCAACTATACCTTTCCAATCATCTAATTACCTGAACACCACAGGCACTGATTCTTCAATGAATCCTGGAATGACACACAATATTGGTGAAGCGGGCTTCCTGCAAACCCCAGAAAATGGAGGGCAAGGAAACCCATCGATCAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCATTGGATATCACAAAATTCACCAACTACCATGAGCTACGCGGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCATGGCCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTTAACTCAGTCCCAATTCAGAGGCTCTCTAGTGGCGTGTGTGATGACTATGCAGGCCATGAGGACCCAAGAAGTATAAGCACTGGGATAACAACTGTGGGTTCTTTAAACTACTGA 2754 0.4539 MSFNYHIHDIGMGFFAGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLSPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGINSSLMWLRDTERGLPSLNFPGVGVSPWMQPRLDPSMMNYQTDVYQAMAAAALQDMWTSDPSKQHPTSLLQFQQPQNFLNRSSPLVQTQILQQSQSQQSFPNSQEIPHPSQSQAQTHFQQHLQHQHSFNNQNQHHLLQQQQSQQPQQQQQQLQQQQQQLQQQQVVDHQQISNAVSTMSQFVSAPQSQSPPMQAISSLGHQQSFSDSNGNPVTNAIVSPLHSILGSFSQDETSHLLNLPRTSWVPVQPSTAWPPSKRVAVDPLFSSGASQCVLPQVEQLGQPQSTMAQNAITLPPFPSRECAIEGSTDPQNHLLFGVNIEPSSLLMHNGLSSLKGVSSNSGPPTIPFQSSNYLNTTGTDSSMNPGMTHNIGEAGFLQTPENGGQGNPSIKTFVKVYKSGSFGRSLDITKFTNYHELRGELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSVPIQRLSSGVCDDYAGHEDPRSISTGITTVGSLNY* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02781 917 Gene3D - 127 230 IPR015300 -
Phac2g02781 917 FunFam Auxin response factor 293 365 - -
Phac2g02781 917 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Phac2g02781 917 Gene3D - 293 365 - -
Phac2g02781 917 FunFam Auxin response factor 127 231 - -
Phac2g02781 917 FunFam Auxin response factor 779 873 - -
Phac2g02781 917 CDD B3_DNA 128 229 IPR003340 GO:0003677
Phac2g02781 917 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 873 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac2g02781 917 SUPERFAMILY DNA-binding pseudobarrel domain 114 258 IPR015300 -
Phac2g02781 917 Gene3D - 780 873 - -
Phac2g02781 917 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Phac2g02781 917 SUPERFAMILY CAD & PB1 domains 782 860 - -
Phac2g02781 917 ProSiteProfiles PB1 domain profile. 784 868 IPR000270 GO:0005515
Phac2g02781 917 SMART B3_2 129 231 IPR003340 GO:0003677
Phac2g02781 917 MobiDBLite consensus disorder prediction 485 521 - -
Phac2g02781 917 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02781 Phac-Chr2 29398397 29407523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02781 3 485 B3 DNA Binding Superfamily AT1G30330 84.362 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac2g02781 B3 2.2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02781 - - gmx:100777789 1583.93