Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02780 ATGAAACTTTCATCAGCAGGTTTTAGTACTCCACCCCAGGAAGGAGAAAAGCGAGTACTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCACTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTAGTATATTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAAGTGGATGGCCATATACCAAATTATCCAAGCTTACCACCACAGCTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACCGAGACCGATGAAGTATATGCACAGATGACTTTACAACCTCTGAGTCCTCAAGAGCAGAAAGAGGCATACCTGCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCAACAAACTACTTTTGCAAAATTCTGACTGCCAGTGACACCAGCACTCATGGGGGATTTTCTGTTCCTCGTAGGGCAGCTGAAAAAGTTTTTCCTCCTTTGGACTTTTCACAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTACATGGTAACGAATGGAAATTCAGACATATCTTCCGAGGTCAGCCCAAAAGGCATTTACTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGCGATTCAGTTCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGCATTCGGCGTGCTAATCGTCCTCAACCTGTGATGCCGTCATCAGTCTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCGACTAATAGTCGTTTCACCATCTTTTATAACCCACGAGCTAGCCCATCAGAATTCGTCATACCTTTAGCAAAGTATGTTAAAGCTGTATATCATACTCGAGTTTCAGTCGGCATGCGCTTTAGGATGCTGTTTGAAACAGAGGAATCCAGTGTTCGTCGATACATGGGCACAATAACTGGCATTAGTGACCTGGATTCTGTTCGGTGGCCAAACTCCCATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACAGCAGGAGAGAGGCAACCCCGGGTGTCTCTTTGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTTCCCCTTAGACTCAAGAGACCATGGCCTCCAGGACTGCCTTCATTCCATGCAGGCTTGAAGGATGATGATTTTGGTATAAATTCTTCACTGATGTGGCTTCGAGACACTGAGAGAGGTCTTCCATCTCTTAATTTTCCGGGGGTTGGTGTTAGTCCTTGGATGCAGCCAAGGCTTGATCCCTCAATGATGAATTATCAAACAGACGTGTACCAAGCTATGGCTGCCGCTGCACTTCAGGATATGTGGACTTCAGATCCTTCTAAACAACATCCTACTTCCTTACTTCAATTTCAGCAACCACAGAACTTCCTGAATAGGAGTTCTCCCTTAGTGCAGACTCAAATCTTGCAGCAGTCTCAATCTCAGCAGTCTTTTCCAAATAGTCAAGAAATACCTCATCCTTCTCAATCTCAGGCTCAAACTCATTTTCAGCAGCATTTGCAGCATCAGCATTCATTCAATAATCAGAATCAGCATCATCTTCTACAGCAGCAACAATCGCAACAACCACAGCAGCAACAACAGCAACTGCAGCAGCAACAACAGCAACTGCAGCAGCAACAAGTGGTTGATCATCAGCAGATTTCAAATGCTGTCTCTACGATGTCTCAGTTTGTTTCAGCACCTCAATCTCAATCGCCACCCATGCAAGCTATCTCTTCACTGGGACATCAGCAGAGTTTTTCTGATTCAAACGGAAACCCTGTGACTAATGCTATTGTTTCTCCCCTGCATAGTATTTTGGGTTCATTTTCCCAGGATGAAACATCTCACCTTCTCAATCTTCCTAGAACCTCTTGGGTTCCTGTTCAACCTTCAACTGCATGGCCGCCCTCCAAACGTGTTGCAGTGGATCCTCTCTTTTCTTCTGGGGCATCTCAATGTGTTCTGCCTCAAGTGGAGCAGTTAGGGCAACCACAGAGTACCATGGCTCAAAATGCAATTACATTGCCACCCTTTCCTAGTAGGGAGTGTGCTATAGAAGGAAGCACTGATCCGCAAAATCATCTTTTGTTTGGAGTAAATATAGAGCCCTCATCACTGCTAATGCATAATGGGTTGTCAAGCCTCAAGGGAGTTAGCAGTAACAGCGGCCCACCAACTATACCTTTCCAATCATCTAATTACCTGAACACCACAGGCACTGATTCTTCAATGAATCCTGGAATGACACACAATATTGGTGAAGCGGGCTTCCTGCAAACCCCAGAAAATGGAGGGCAAGGAAACCCATCGATCAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCATTGGATATCACAAAATTCACCAACTACCATGAGCTACGCGGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCATGGCCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTTAACTCAGTCCCAATTCAGAGGCTCTCTAGTGGCGTGTGTGATGACTATGCAGGCCATGAGGACCCAAGAAGTATAAGCACTGGGATAACAACTGTGGGTTCTTTAAACTACTGA 2751 0.4555 MKLSSAGFSTPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLSPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHAGLKDDDFGINSSLMWLRDTERGLPSLNFPGVGVSPWMQPRLDPSMMNYQTDVYQAMAAAALQDMWTSDPSKQHPTSLLQFQQPQNFLNRSSPLVQTQILQQSQSQQSFPNSQEIPHPSQSQAQTHFQQHLQHQHSFNNQNQHHLLQQQQSQQPQQQQQQLQQQQQQLQQQQVVDHQQISNAVSTMSQFVSAPQSQSPPMQAISSLGHQQSFSDSNGNPVTNAIVSPLHSILGSFSQDETSHLLNLPRTSWVPVQPSTAWPPSKRVAVDPLFSSGASQCVLPQVEQLGQPQSTMAQNAITLPPFPSRECAIEGSTDPQNHLLFGVNIEPSSLLMHNGLSSLKGVSSNSGPPTIPFQSSNYLNTTGTDSSMNPGMTHNIGEAGFLQTPENGGQGNPSIKTFVKVYKSGSFGRSLDITKFTNYHELRGELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSVPIQRLSSGVCDDYAGHEDPRSISTGITTVGSLNY* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02780 916 Gene3D - 125 228 IPR015300 -
Phac2g02780 916 ProSiteProfiles PB1 domain profile. 783 867 IPR000270 GO:0005515
Phac2g02780 916 SUPERFAMILY CAD & PB1 domains 781 859 - -
Phac2g02780 916 SMART B3_2 127 229 IPR003340 GO:0003677
Phac2g02780 916 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Phac2g02780 916 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Phac2g02780 916 Gene3D - 779 872 - -
Phac2g02780 916 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 872 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac2g02780 916 Gene3D - 291 363 - -
Phac2g02780 916 FunFam Auxin response factor 125 229 - -
Phac2g02780 916 FunFam Auxin response factor 291 363 - -
Phac2g02780 916 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac2g02780 916 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Phac2g02780 916 CDD B3_DNA 126 227 IPR003340 GO:0003677
Phac2g02780 916 FunFam Auxin response factor 778 872 - -
Phac2g02780 916 MobiDBLite consensus disorder prediction 483 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02780 Phac-Chr2 29398397 29407523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02780 1 484 B3 DNA Binding Superfamily AT1G30330 85.072 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac2g02780 B3 2.2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02780 - - gmx:100777789 1603.96