Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02772 ATGAAGTTAGATTGGATTGGACTATGCAAAAGCTCGAGTTCAGCGATTTGTAAATTGACTACATGTTGTTTAGCAATAGAGGCTCTGAAAAAACTTCGTGAAAGGAAAGATGCATATGACATAGTGATCAGTGATGTGAATATGCCTGACATGGATGGTTTCAAACTTCTTGAGCAAGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACCAGCAGGGTGATGAAAGGTGTCCAACATGGTGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAACTGAGAAACATATGGCAACACGTCTTTAGAAAAAGGATGCATGAAGCAAGAGATTTTGAAAGCCATGAGGGTTTTGAAGCCCTTCATTTGATGATGAATGGATCAGATCAGTCCGATGATGGTAACCTGTTTGCTGTAGAAGATATTACCTCAACAAAGAAAAGAAAAGATGCAGATAACAAACACGACGATAAAGAATTTGGAGATCATTCTCCCTCAAAGAAAGCTAGGGTTGTTTGGTCTGTGGACCTTCATCAAAAATTTGTCAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTTGATTTGATGACTGTTCCCTGGTTGACTAGAGAAAACGTTGCTAGTCACTTGCAGAAATACAGGCTCTACTTGAGTAGGTTGCAAAAGGAAAATGATCAGAAATCTTCCTCAAGTGGAATAAAGCATTCGGATTCACCTTCAAAAGATCCAGGAAGTTTTAGTTTGCTAAACACTGCAAACAACAAGCAACAAAATGATGTTGCCATTGACAGTTTCAGTCATTCAGATGGAAGTTTACTATTTCAGATGGATGCTCCAAGTCATGAAGGTGATCTCAAGGGAATCGTGTCAGAGCCTACAACCGAAAAAAGTGGAACTCCACCAAAATGTTCACAGATGAGCCTCAATCAACCCTTTTCATCTTTAGAGTCATCAGAAGCAAGCCATGCAGTATTTGATTGCACCATACCAACACAGTACTCTTGGGGTGAGTTTCCTAAAGGACCACTCAAAGAAGAACAGAAGACAATTGTTCAATTAGAGGATAGCTTCAGCCAATTGCCATTAAATGGTACAAGGCAGCACATTCAGGTTGATCAATCACAATCGATTGCTTCGATTAATTCTAATCCTTCTATAACAGAAGAAGAGGTTGCCCCCAGCTTAGACATCAAACCTTTATATGCTGGTTACAAGAATGATTATGTGAGTCCTGTGAGTTCAATAGGATCTGCAGTTGACACCTTTCCTAATCAGTCCAAAAGTCTCATTGTGAATGATCAATCTTCAGAGCCCATTTTCACCTCAAATTTGGGCTTGAAAACTCACGGATTTGATCTAGATTGCATTTCTGATCTGGATTTTTACCAAAGGAATCTATTATTGGGTGGTGAGGCAGCTTCTGCACCTTTGGAGGACGACCTGAATTTCTTTTTGCTGCAAGCTGATTGGTACAACATGAATTTTGGGCAGCAGAATATAAATATGTCAGAATGTTATGATCCAAGGCTTGTTGCTGAAGCCCCTAGCTACTTTTATGATTCTTCAGATTATTCATCGGTAGATCAAAGTCTATTCATAGCATGA 1644 0.3929 MKLDWIGLCKSSSSAICKLTTCCLAIEALKKLRERKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHEARDFESHEGFEALHLMMNGSDQSDDGNLFAVEDITSTKKRKDADNKHDDKEFGDHSPSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMTVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGSFSLLNTANNKQQNDVAIDSFSHSDGSLLFQMDAPSHEGDLKGIVSEPTTEKSGTPPKCSQMSLNQPFSSLESSEASHAVFDCTIPTQYSWGEFPKGPLKEEQKTIVQLEDSFSQLPLNGTRQHIQVDQSQSIASINSNPSITEEEVAPSLDIKPLYAGYKNDYVSPVSSIGSAVDTFPNQSKSLIVNDQSSEPIFTSNLGLKTHGFDLDCISDLDFYQRNLLLGGEAASAPLEDDLNFFLLQADWYNMNFGQQNINMSECYDPRLVAEAPSYFYDSSDYSSVDQSLFIA* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02772 547 Pfam Myb-like DNA-binding domain 177 227 IPR001005 -
Phac2g02772 547 Gene3D - 7 166 - -
Phac2g02772 547 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 263 IPR045279 GO:0009736
Phac2g02772 547 SMART REC_2 1 105 IPR001789 GO:0000160
Phac2g02772 547 MobiDBLite consensus disorder prediction 237 263 - -
Phac2g02772 547 NCBIfam myb-like DNA-binding domain, SHAQKYF class 175 228 IPR006447 GO:0003677
Phac2g02772 547 Pfam Response regulator receiver domain 23 104 IPR001789 GO:0000160
Phac2g02772 547 ProSiteProfiles Response regulatory domain profile. 1 109 IPR001789 GO:0000160
Phac2g02772 547 MobiDBLite consensus disorder prediction 152 171 - -
Phac2g02772 547 MobiDBLite consensus disorder prediction 295 323 - -
Phac2g02772 547 CDD REC_typeB_ARR-like 20 109 - -
Phac2g02772 547 FunFam Two-component response regulator 171 234 - -
Phac2g02772 547 SUPERFAMILY CheY-like 21 120 IPR011006 -
Phac2g02772 547 SUPERFAMILY Homeodomain-like 173 232 IPR009057 -
Phac2g02772 547 Gene3D - 172 234 - -
Phac2g02772 547 MobiDBLite consensus disorder prediction 305 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02772 Phac-Chr2 29272747 29276842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02772 68 547 Response Regulator Gene Family AT1G67710 38.677 1.12e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac2g02772 Response_reg 1.6e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02772 K14491 - gmx:100778324 908.672