Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02762 ATGCTCGTGTTCGATGCTGTGTTGGGAACGCTCAATGTGGCATTCCTTTATGCCATTTTGATATGGGTTTTGGTGGATAGCTTGAGACAAAGCAAGCGTGCCCGTGTTCCAGATGGGTATTTCAAACGAGGACCAATGCTTTTGCCTCTGTTCACTGTTCTATCCTCTGCTCTTATTTCTGTTATCAACATGGCTCTTGCTTTTCGCCAATACAGCTCCACCAGAGCCATAGGATTTAACTCTGTTTCATTGGCACTCACTTGGGTTTTGGCTACCGTCGTTTCGTTTTATTCAGTGAGGACCAGAGTGAGGGAGAATAAGAGGTTCCCTCTTGTGCTCGTACTGTGGTGGGTTTTTTCTTCTCTCGTGGATGCGCTCTCTCTGTCTGTAAGGCTGGTGAAAGATTTCGAAGCATTCGACTTGTGGTTTTTCTTGTCAGAGGATAACTTAGTTGCTTCATTTTCTTTGCCTTTGTTGGTGCTTCTTTGTTTCAATGTGTGTAGAGGGGAGCACAGTGATATGGAAGAGGGGTTGCTTCAGATGGAGGGGGAGTGTTCCGTGGAGGAACACGATGAAGAGGACTTCACTAATGCAAGTGTGTGGAACAAGCTTATATTCCGTTGGTTGAACCCCATTTTCAGAACGGGTCGGGTTAAAAAGCTTGAACTTTCTCATATTCCTCCCCTTCCTTTTTCCGAATCGGCGGAAAATGCTTCTTCCATGTTGGAAGGGTCACTTCGGAAACAGAAACTCAGAGAGGGCTCCTTGGCAAAAGCTATAGCCGATTCTATATGGAAGTCTTTGGCCTTAAATGCAGTTTTAGCTGGTGTTAACACAGGTGCCTCATATATAGGTCCCTTGTTGATCACAAATTTTGTGAATTTTTTATTGGGGAATAATGGTGATTCAAGCGTCCAATATGGATTGGTTCTTGCATTTGTTTTCTTCCTCGCCAAGACCGTGGAGTCACTAAGTCAAAGACAATGGTACTTCGGGGCTCAAAGAATTGGAATCCAGGTGCGTGCAGCTCTTATGTCTCTAATTTATAGCAACTCCCTAATGATGAAGTGTGCTGGACCAACACAAGGTAAAATCATCAATCTGATTAATGTTGATGTTGAAAGAATTGGGGACTTCTGCTGGTACATTCATGGACTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGATCATCTTATACATAAATCTGGGTTATACCCCTTCTTTTGCTGCATTTGGTGTCACCATTTTGGTCATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAGTTTGAACTCCAAGATCATGGAAGCTAAGGATTCAAGAATCAAAATGACATCAGAGACCCTGAAGAACATAAGAATTTTAAAATTGCATTCATGGGAGACCTCATTCTTGCAGAAACTCCTCCAACTTAGGGAAACTGAGAGGGGGTGGCTGCAGAAATACCTCTATACATGCTCAGCAGTAGCAACACTATTCTGGACATCACCAACTTTAGTTTCTGTTGTCACCTTTGGTGCTTGCATACTAGTGAAAACAGAACTAACAGCAGCTACAGTACTCTCAGCTTTAGCAACTTTTCGTATTTTGCAAGAACCAATCTATAACTTACCTGAGCTTATCTCCATGATCATTCAAACAAAAATCTCCGTCGATCGAATCCAGGAGTTCATTAAGGAAGAGGATCAAAACCAATTCATAAATAGGCACACTTCAAAAAAATCATCTGCTACTATTGAAATTAACCCAGGGGAATATGCATGGGAAACACACGATCAGACCCACAAGAAACCAACAATTCAAATTACAAGAAAGTTAGTGATAGAGAAAGGTCAGAAGGTAGCAGTTTGTGGGCCAGTGGGGTCTGGCAAATCAAGCTTGCTTTGCTGCATGCTTGGGGAGATTCCATTAGTATCTGGGGCAGTAACCAAAGTTTATGGGACTAGAAGTTATGTACCCCAAAGTCCTTGGATTCAGTCTGGAACCGTAAGAGAGAATATATTGTTTGGCAAGCAAATGAACAAGGAGTTTTATGATGATGTTGTGGATGGCTGTGCTTTGCAGCAGGACATCAACATGTGGGGTGATGGAGATTTGAACCTCGTGGAGGAGAGGGGCATAAACTTGAGTGGTGGGCAGAAACAGCGGGTTCAATTGGCAAGGGCTGTTTATAATGATTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTCATGAAACTTTTATATGATAAAACGGTTGTTTATGCTACCCATCAACTGGAATTCTTGGAATCTGCAGACCTCATTTTGGTGATGAAAGATGGAAAAATAGTGGAGTCAGGAAAGTATAAAGATCTTATAGCATGTCCCAACTCTGAACTTGTTCAACAAATGGCTGCTCACCAAGAAACAGTACACCAAATAAACCCAAGCCAAGAAGATGATTTTGCTAGCTACAGACCCTGCCCAAAAAATCAAATTGAAGATACTCCAGAAAATATTCAAGAGATCATGGATAATTGGAAGAGAAACAAAGAAGAGGAAAGAGAGACGGGTCGAGTGAAATGGAGTGTTTACTCAACTTTTGTCACATCTGCTTACAAAGGAGCACTCGTTCCGATTATTCTTCTCTGCCATACCCTCTTTCAAGTAATGCAAATTGGAAGCAATTATTGGATGTCATGGGCTACAGAGCAGAGGGGCAGGGTCAACAACATGGAGCTAATGAAAACATTTGTTCTTCTATCTTCTGGGGGCACCATCTTCATACTGGGAAGGACTGTTTTAATGGCAGCTGTTGCTGTGGAAACTGCTCAACGCCTTTTTCAGGGAATGATCACATCAGTTTTCCGGGCACCTGTTTCATTTTTTGACACCACACCTTCAAGCCGAATTTTGAGTAGGTCATCAACAGATCAAAGTACAGTAGACACAGACATACCATACAGATTAGCTGGACTAGTATTTGCGTTGATACAGTTATTGAGTATAATCGTGCTAATGTCCCAAGTGGCCTGGCAAGTCATTCTCCTCTTTTTTGTGGTTTTTGCTATTTCCATCTGGTATCAGGTAAGAACTGTATCTATCTTTGACAATGTACACAAATTAAATCATATAATTTTCCTATCAAAATTTTATCCGCTTGAACTAAAATAG 3189 0.4158 MLVFDAVLGTLNVAFLYAILIWVLVDSLRQSKRARVPDGYFKRGPMLLPLFTVLSSALISVINMALAFRQYSSTRAIGFNSVSLALTWVLATVVSFYSVRTRVRENKRFPLVLVLWWVFSSLVDALSLSVRLVKDFEAFDLWFFLSEDNLVASFSLPLLVLLCFNVCRGEHSDMEEGLLQMEGECSVEEHDEEDFTNASVWNKLIFRWLNPIFRTGRVKKLELSHIPPLPFSESAENASSMLEGSLRKQKLREGSLAKAIADSIWKSLALNAVLAGVNTGASYIGPLLITNFVNFLLGNNGDSSVQYGLVLAFVFFLAKTVESLSQRQWYFGAQRIGIQVRAALMSLIYSNSLMMKCAGPTQGKIINLINVDVERIGDFCWYIHGLWLLPVQVILALIILYINLGYTPSFAAFGVTILVMVCNTPLANMQESLNSKIMEAKDSRIKMTSETLKNIRILKLHSWETSFLQKLLQLRETERGWLQKYLYTCSAVATLFWTSPTLVSVVTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMIIQTKISVDRIQEFIKEEDQNQFINRHTSKKSSATIEINPGEYAWETHDQTHKKPTIQITRKLVIEKGQKVAVCGPVGSGKSSLLCCMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMNKEFYDDVVDGCALQQDINMWGDGDLNLVEERGINLSGGQKQRVQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLESADLILVMKDGKIVESGKYKDLIACPNSELVQQMAAHQETVHQINPSQEDDFASYRPCPKNQIEDTPENIQEIMDNWKRNKEEERETGRVKWSVYSTFVTSAYKGALVPIILLCHTLFQVMQIGSNYWMSWATEQRGRVNNMELMKTFVLLSSGGTIFILGRTVLMAAVAVETAQRLFQGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFVVFAISIWYQVRTVSIFDNVHKLNHIIFLSKFYPLELK* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02762 1062 FunFam Multidrug resistance-associated protein 4 567 827 - -
Phac2g02762 1062 SMART AAA_5 613 795 IPR003593 GO:0016887
Phac2g02762 1062 CDD ABCC_MRP_domain1 582 787 - -
Phac2g02762 1062 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 810 IPR003439 GO:0005524
Phac2g02762 1062 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 885 1036 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02762 1062 FunFam ABC transporter C family member 10 252 565 - -
Phac2g02762 1062 Pfam ABC transporter transmembrane region 270 536 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02762 1062 Pfam ABC transporter transmembrane region 892 1043 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02762 1062 Pfam ABC transporter 609 739 IPR003439 GO:0005524
Phac2g02762 1062 Gene3D ABC transporter type 1, transmembrane domain 830 1049 IPR036640 GO:0005524|GO:0016020
Phac2g02762 1062 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 269 549 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g02762 1062 Coils Coil 1062 1062 - -
Phac2g02762 1062 SUPERFAMILY ABC transporter transmembrane region 883 1038 IPR036640 GO:0005524|GO:0016020
Phac2g02762 1062 SUPERFAMILY ABC transporter transmembrane region 264 564 IPR036640 GO:0005524|GO:0016020
Phac2g02762 1062 Gene3D - 604 829 IPR027417 -
Phac2g02762 1062 CDD ABC_6TM_ABCC_D1 270 557 IPR044746 GO:0140359
Phac2g02762 1062 ProSitePatterns ABC transporters family signature. 712 726 IPR017871 GO:0005524|GO:0016887
Phac2g02762 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 800 IPR027417 -
Phac2g02762 1062 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 196 1048 - -
Phac2g02762 1062 Gene3D ABC transporter type 1, transmembrane domain 255 567 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02762 Phac-Chr2 29184598 29191117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02762 600 842 Calmodulin-binding Proteins AT2G36910 27.481 3.47e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02762 - - pvu:PHAVU_002G176600g 1986.07