Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02753 ATGGAGTCGGATTCAGACTCCGACGGATCTCACATCTCCGCAACTCCTCCCAGACAATTAAGTTCATCACCGCCGCGGCCGCCACCACCACCTCTCGAGGTTTCAAACAAATCCCGAGTCAGAATCAAACCCTCAAAATCAAAACCAGCCCCTTCTGGATCCTCCAAAGTCCCGTCGAAACCCGACCGCATCCAGGAAACACCTCTCTCCCTTCCCACCGATCTCCCCTTCCAAATTCGTCGACCCTCCGGCGCGGCGTCAGTTTCCTCCTCCATTGAAACCCTCCCTGCTGGTTTCTTCTCCTCCTCATACTCTGCTTCGTTCGCGAAGATTCGAAGACCGGTCGTTAACTTTGAACCTTCTGGAATCGAACCTGTTCTTACTTCCGCCGCGTCTGATTCACGCGCCGAGAGCGCCGATGCGAGGAAACGCGGAAAGGCGCGCCTTCCCAACCTGATAGGTGCCAGCGCGCCTATGCCTGTCGTGAAGCCTCGACCATGCAGCGGCGGCGATGGAAACTTTGTGAAGCTGAACTTGAGTGGCAAGCGAAGGAAGTTCCTGAACAAGAAGGGAAAATTCGGCGGGAAAAGGTACAAGAGAGGGAAATTCAAATCGCAGCAGGAAAAGGAGGGGGAAGAGAAGGATATTGGAGATTTGAAGCAGAGAGGGGGTTGTAAGATTCGTGAGATTGATTGCGCTGTGGTGGAAGAGGCTGTGGCTGCGGCCCTCGATGAGCCTTCGGAGGAGAATTTGTTGGAGATTTTGAAATTGGTTTATGGCTATGATTGTTTTCGAGACGGGCAGGTTGATGCAATTAAGATGGTTCTTGCTGGGAAGTCAGGAGTGGTTGTTTTGCCGACCGGAGCTGGGAAGTCGCTGTGTTATCAGTTGCCTGCTCTGATCTTGCCTGGGATTACATTGGTTGTTAGTCCATTGGTGGCTTTGATGATTGATCAGCTGAGGCAATTGCCTTATGTGATTAGGGGTGGTCTTCTATCCAGTACTCAGACACCTGAAGAAGCCTCTGAATCACTGATGCAGCTTCGACAAGGGGGGATAAAGGTGCTTTTTGTTTCGCCAGAGCGGTTTCTGAATGAAGAGTTTCTGTCTACTATTTCTTCTTTGTCAGCCATATCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCGTCTTTTATGAGACTTAGAGCATCTCTGCTTCGTAAGACACTTAATGTTCGTGCTGTGCTTGCAATGACAGCAACTGCTACTACCACAACTTTAGATGCCATCATGTCTGCTCTAGATATCCCTTCCACAAATCTTATTCAGAAGGCGCAGTTAAGGGACAATTTTCATTTATCAGTGTCTATGGTCAGAAACAGAATGAAAGACCTTCTGATTTTGATAAAGTCTCCTCCTTTTGCTGAAGTTCAGAGCATGATCATATACTGCAAATTTCAGTATGAAACTGATCAAATTAGCAGATATTTGAATGATAACAATATCTTGGCAAAGAGTTATCATAGTGGTATCACTGCAAAGGAACGTAGCTATGTACAGGACTTGTTTAATTCCAACAAGATCAGAGTGGTTGTCGCGACTGTGGCATTTGGCATGGGACTAGATAAAAGTGATGTTGGAGCTGTAATTCATTACAGTTTGCCTGAAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCTGGAAGGGATGGGAGGTTGTCCTACTGCCACCTATTTTATGATGATGAGACATTTTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAGTAGATGAATATGCAGTGAACAAATTTCTGCGTGAAGTCTTTCCTGCTGATAAAAGCTCCTGTGGGAAAATATGTTCATTAATCAAAGAATCTGCTTCGCGCAGGTTTGATATGAAAGAAGAGGTGATGCTTACTCTTCTGACACGCTTGGAGTTGGGTCATGTGCAGTACTTGCAGTTACTTCCACGGATAAATGCAACTTGCACTTTGGCTTTCCATAAGACTACTCCGCCATTACTTGCCCAAAAAGTATCTGCTATAGCTGTAATTCTAAAAAGATCTGAAAATAAGCATGGGAAATATATTTTTGACATCCCTACTGTGGCAAATGACATGGGGGTTACAGCAGTTCAATTAACAAATCAGTTGTACGACCTGAAGCTGATGGGAGAAATAACTTATGAAATGAAGGACTTGGCCTACTGTTATAGGATCATTGAAGTCCCTACAGACTTGTTATCACTATCAGAAGATATTACCCAATGGTTATCAGAAGTTGAAAATTGTAAGGTACGAAAAATGGATGCAATGTTTAGTGCTGTATATTTTGCATTAAATCTATGTGATAAGATGCAAGGTTGCAGCGGCACCAATCACACACCATGCGTGCAAAGGAAAATATTGGATTACTTTTCTGGAGTTGATAATACTGATTTCTGCAAGAAAATTGGCCAAAGCAGTCCTTTCCTGCGAGCGGATATAAAGGTCTTTCTGCAGAGCAATTCACAGGCCCGATTTACACCAAGAGCTGTTGCGAGAGTAATGCATGGAATTGCAAGCCCAGCGTATCCTTCAACAGTATGGAGTAAAACTCATTTCTGGGGAAGGTATACACGAATAGACTTTAAGGTTGTGATGGAAGCAGCAAAAGAAGAACTTAAAAAAATCGTCGGAAAAGATATTCTCTAA 2706 0.4446 MESDSDSDGSHISATPPRQLSSSPPRPPPPPLEVSNKSRVRIKPSKSKPAPSGSSKVPSKPDRIQETPLSLPTDLPFQIRRPSGAASVSSSIETLPAGFFSSSYSASFAKIRRPVVNFEPSGIEPVLTSAASDSRAESADARKRGKARLPNLIGASAPMPVVKPRPCSGGDGNFVKLNLSGKRRKFLNKKGKFGGKRYKRGKFKSQQEKEGEEKDIGDLKQRGGCKIREIDCAVVEEAVAAALDEPSEENLLEILKLVYGYDCFRDGQVDAIKMVLAGKSGVVVLPTGAGKSLCYQLPALILPGITLVVSPLVALMIDQLRQLPYVIRGGLLSSTQTPEEASESLMQLRQGGIKVLFVSPERFLNEEFLSTISSLSAISLVVIDEAHCISEWSHNFRPSFMRLRASLLRKTLNVRAVLAMTATATTTTLDAIMSALDIPSTNLIQKAQLRDNFHLSVSMVRNRMKDLLILIKSPPFAEVQSMIIYCKFQYETDQISRYLNDNNILAKSYHSGITAKERSYVQDLFNSNKIRVVVATVAFGMGLDKSDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETFFKLRSLMYSEGVDEYAVNKFLREVFPADKSSCGKICSLIKESASRRFDMKEEVMLTLLTRLELGHVQYLQLLPRINATCTLAFHKTTPPLLAQKVSAIAVILKRSENKHGKYIFDIPTVANDMGVTAVQLTNQLYDLKLMGEITYEMKDLAYCYRIIEVPTDLLSLSEDITQWLSEVENCKVRKMDAMFSAVYFALNLCDKMQGCSGTNHTPCVQRKILDYFSGVDNTDFCKKIGQSSPFLRADIKVFLQSNSQARFTPRAVARVMHGIASPAYPSTVWSKTHFWGRYTRIDFKVVMEAAKEELKKIVGKDIL* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02753 901 NCBIfam RecQ family ATP-dependent DNA helicase 253 602 IPR004589 GO:0004386|GO:0006310
Phac2g02753 901 Gene3D - 234 442 IPR027417 -
Phac2g02753 901 Pfam DEAD/DEAH box helicase 266 428 IPR011545 GO:0003676|GO:0005524
Phac2g02753 901 PANTHER DNA HELICASE RECQ FAMILY MEMBER 240 755 - -
Phac2g02753 901 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 463 613 IPR001650 -
Phac2g02753 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 592 IPR027417 -
Phac2g02753 901 SMART ultradead3 260 456 IPR014001 -
Phac2g02753 901 CDD SF2_C_RecQ 450 583 - -
Phac2g02753 901 MobiDBLite consensus disorder prediction 1 88 - -
Phac2g02753 901 Gene3D - 450 634 IPR027417 -
Phac2g02753 901 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 272 442 IPR014001 -
Phac2g02753 901 FunFam ATP-dependent DNA helicase Q4 232 442 - -
Phac2g02753 901 SMART helicmild6 493 574 IPR001650 -
Phac2g02753 901 MobiDBLite consensus disorder prediction 20 34 - -
Phac2g02753 901 CDD DEXHc_RecQ4-like 252 445 - -
Phac2g02753 901 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 379 388 IPR002464 -
Phac2g02753 901 MobiDBLite consensus disorder prediction 192 216 - -
Phac2g02753 901 FunFam ATP-dependent DNA helicase Q-like 5 450 641 - -
Phac2g02753 901 MobiDBLite consensus disorder prediction 201 216 - -
Phac2g02753 901 Pfam Helicase conserved C-terminal domain 480 573 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02753 Phac-Chr2 29095831 29105713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02753 479 606 Eukaryotic Initiation Factors Gene Family AT3G19760 30.769 8.14e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02753 K10730 - gmx:100811214 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02753 2 29095831 29105713 Phac2g02753 2 29095831 29105713 ECH