Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02701 ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAAGCTCAAGCCAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGACAAGTTCCTGCTCACTCAAGAGCCCCCGCAACAGCCAACCAGTGGATCCTTGTTTCTATTTAACAAAAGAGTCCTGCGTTTCTTCCGGAAAGATGGTCATAACTGGCGCAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAACGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTATGCACACGGAGAGCAGAACCCTAGTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGAATATGAGCATATTGTTCTTGTGCATTATAGAAACACAAGTGAGGGAAGACTAAGTTCTGGAGGCGGTGCACAATTGTCACCAAGTTCCTCTTCTGCATTTAGTCAGAGTCCTAGCCCATATTCTAATCAGAATCCAGGGTCAACATCCATACTTGTTGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCTGGAACTACAGAAGTTACGTCTGATATATTCATTCTGAACAATAAAATGGATCACATGGATGGAACTGATGCAGAATCAGGAACCTCGTCTGAGCTTGAAGTTACTCAAGCTTTGCGCCGACTAGAGGTACAATTAAGTTTGAATGAGGACAGCTTTGAAGATATTGCTCCCTTCTGCAATAAGCACGAAGCTGCCCACGATCCAAACCCTCTACACAATCAAACGGTGATCAGCAATCAAGATCAATCTGCAGCTTTCTCTGGATCTGATGATCAAGGGCTATTTTATGATGAATATAAGGCAAGACAAGGTGATGGTGGTGAATGTTATCATGAACTAATAGACCATGGATACCCTGACGGAAATGAAAAGGCTTTATGGACAGGGGTGCTTGGATCATGCAAGTCCTCAACTGCTGTCAAGTTACCACCAAAAAATGTATACTTGACGGCTGGAAATGAAAATTCAGTATCTTTTCCGGGAAGGGTACTAGTACCAGTTTCCAACCAGGAAGAGAGTCACTGGCTCAATTTCAACAGTGATAATTCTCAAAGCTCTGTTTTCTCACCACCTCAAGGGGTGGATGAAGTCAAATTTCCTGCATATTCTTCTATGGTGGAAACACGAGTAACTAATTCTGACTACTATGGAACATTCTTTGACCAAAGCCAAATAGTAGCACCTCTGGATGCAGATTCAAGCTTGACCATTGCACACAAACAGAAATTTACTATTAAGACATTCTCCCCAGAATGGGGTTATGCCACTGAGACCACTAAGGTCATCATTGTTGGGTCTTTTCTCTGTCATCCGTCAGATTCTACCTGGGCATGCATGCTTGGTGATGTTGAAGTTCCTGTTCAGATAATTCATGATGGTGTAATCTGTTGTGAAGCTCCACCTTACCTTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAAGTCAGAGAGTTTGAATATCGTGACAAGACCTATAGTTGCACCCAATGTACTCAATTGAAAACAGAAGCCACTAGAAGTCCTGAAGAGCTGTTATTACTTGTTAGATTAGGGCAGATGCTTCTTTCTACATCAACAATAAAGAATGACAACATAGAATCGGGAATTCCTCTCATAAAACAGAAAGCTGATGATGACTCATGGAGCCATATTATAGAGACTCTTCTAGTTGGTGGTGGAACGTCGACTAGTACTACTGATTGGCTTCTCGAAGAACTTCTAAAGGATAAGCTTCAACAGTGGCTTTCTTACAGATCTCAGGAAAGAGATGAAGAGACAGACTGCTCTTTGTCCAAGAAAGAGCAAGGCATTATTCATATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTTAGTTGTGGAGTGAATATAAATTTCCGTGACATCAGTGGGTGGACTGCCCTTCATTGGGCTGCCCGTTTCGGAAGGGAAAAAATGGTCGCTTCACTTGTAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAACTGCACAAGACCCAATCGGTAAAACTGCTGCATCTATTGCAGCCAGCAATGGGCACAAGGGACTAGCAGGATATCTTTCAGAGGTAGCTGTGACAAGCCACCTATCATCACTTGTACTGGAAGAGAGTGAATTATCTAAAAGTTCTGCCCAGCTTCAGGCAGATATGACTGTTACCAGTGTCTCCAAGGAAAATCTTGCTGCCAATGAGGATCAGGCGTCACTCAAACATACCTTGGCTGCTGTCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATCGGCTTTTCGGTCACATTCTTTTAGAAAACGGAGAGCAAGAGAAGGTATAAATAGTTGTGGTACGAGTGTAGGTGGCATTGGTAGCATTAAAGAAATTTCTGCTATGTCAAAACTTGCCTTTCGAAGCTCACGTGAACATAATTCAGCTGCTTTATCAATTCAGAAGAAATATCGCGGTTGGAAAGGTCGCAAAGATTTCTTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATTTTGGACAAGGTCGTGCTACGATGGAGAAGAAAAGGAGCTGGTTTACGAGGTTTCCGACCAGAGATGGACATTAATGAAAATGATGATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAGGTGGATGTAGAAATTGAAAAGGCTGTTTCACGGGTGATGTCCATGGTCGACTCACCAGATGCTCGTGACCAATATCGTCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACTTGTGGCGGGTACCAGTGACGAAGTATCATCAACCACTTCTGTGGGGAATGCCTTATTTATGGAAGATGACTTATATCCATTTCCCTAG 2964 0.4329 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHDKFLLTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPEYEHIVLVHYRNTSEGRLSSGGGAQLSPSSSSAFSQSPSPYSNQNPGSTSILVDSYEPNQSFSSPGTTEVTSDIFILNNKMDHMDGTDAESGTSSELEVTQALRRLEVQLSLNEDSFEDIAPFCNKHEAAHDPNPLHNQTVISNQDQSAAFSGSDDQGLFYDEYKARQGDGGECYHELIDHGYPDGNEKALWTGVLGSCKSSTAVKLPPKNVYLTAGNENSVSFPGRVLVPVSNQEESHWLNFNSDNSQSSVFSPPQGVDEVKFPAYSSMVETRVTNSDYYGTFFDQSQIVAPLDADSSLTIAHKQKFTIKTFSPEWGYATETTKVIIVGSFLCHPSDSTWACMLGDVEVPVQIIHDGVICCEAPPYLPGKVTLCITSGNRESCSEVREFEYRDKTYSCTQCTQLKTEATRSPEELLLLVRLGQMLLSTSTIKNDNIESGIPLIKQKADDDSWSHIIETLLVGGGTSTSTTDWLLEELLKDKLQQWLSYRSQERDEETDCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLVASGASAGAVTDPTAQDPIGKTAASIAASNGHKGLAGYLSEVAVTSHLSSLVLEESELSKSSAQLQADMTVTSVSKENLAANEDQASLKHTLAAVRNVTQAAARIQSAFRSHSFRKRRAREGINSCGTSVGGIGSIKEISAMSKLAFRSSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRPEMDINENDDEDEDILKVFRKQKVDVEIEKAVSRVMSMVDSPDARDQYRRMLEKYRQAKAELVAGTSDEVSSTTSVGNALFMEDDLYPFP* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02701 987 ProSiteProfiles Ankyrin repeat profile. 654 686 IPR002110 GO:0005515
Phac2g02701 987 FunFam Calmodulin-binding transcription activator 2 419 512 - -
Phac2g02701 987 MobiDBLite consensus disorder prediction 133 184 - -
Phac2g02701 987 SUPERFAMILY Ankyrin repeat 624 716 IPR036770 -
Phac2g02701 987 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Phac2g02701 987 Pfam Ankyrin repeats (3 copies) 636 714 IPR002110 GO:0005515
Phac2g02701 987 CDD IPT 425 510 - -
Phac2g02701 987 Gene3D - 826 875 - -
Phac2g02701 987 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Phac2g02701 987 ProSiteProfiles Ankyrin repeat region circular profile. 654 680 - -
Phac2g02701 987 Gene3D Immunoglobulins 419 513 IPR013783 -
Phac2g02701 987 Gene3D - 545 719 IPR036770 -
Phac2g02701 987 Pfam IQ calmodulin-binding motif 852 871 IPR000048 GO:0005515
Phac2g02701 987 Pfam IQ calmodulin-binding motif 829 847 IPR000048 GO:0005515
Phac2g02701 987 FunFam Calmodulin-binding transcription activator 4 isoform A 535 719 - -
Phac2g02701 987 ProSiteProfiles IQ motif profile. 827 856 IPR000048 GO:0005515
Phac2g02701 987 ProSiteProfiles IQ motif profile. 773 796 IPR000048 GO:0005515
Phac2g02701 987 ProSiteProfiles IQ motif profile. 850 875 IPR000048 GO:0005515
Phac2g02701 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 774 873 IPR027417 -
Phac2g02701 987 Pfam IPT/TIG domain 425 508 IPR002909 -
Phac2g02701 987 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 958 - -
Phac2g02701 987 SMART ANK_2a 693 722 IPR002110 GO:0005515
Phac2g02701 987 SMART ANK_2a 654 683 IPR002110 GO:0005515
Phac2g02701 987 FunFam Calmodulin-binding transcription activator 2 826 874 - -
Phac2g02701 987 SUPERFAMILY E set domains 425 509 IPR014756 -
Phac2g02701 987 SMART iq_5 826 848 IPR000048 GO:0005515
Phac2g02701 987 SMART iq_5 771 793 IPR000048 GO:0005515
Phac2g02701 987 SMART iq_5 849 871 IPR000048 GO:0005515
Phac2g02701 987 SMART CG_1_2 12 130 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02701 Phac-Chr2 28502011 28511359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02701 5 959 CAMTA Transcription Factor Family AT1G67310 53.147 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac2g02701 CG-1 2.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02701 K21596 - gmx:100786880 1610.89