Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02700 ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAAGCTCAAGCCAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGACAAGTTCCTGCTCACTCAAGAGCCCCCGCAACAGCCAACCAGTGGATCCTTGTTTCTATTTAACAAAAGAGTCCTGCGTTTCTTCCGGAAAGATGGTCATAACTGGCGCAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAACGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTATGCACACGGAGAGCAGAACCCTAGTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGAATATGAGCATATTGTTCTTGTGCATTATAGAAACACAAGTGAGGGAAGACTAAGTTCTGGAGGCGGTGCACAATTGTCACCAAGTTCCTCTTCTGCATTTAGTCAGAGTCCTAGCCCATATTCTAATCAGAATCCAGGGTCAACATCCATACTTGTTGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCTGGAACTACAGAAGTTACGTCTGATATATTCATTCTGAACAATAAAATGGATCACATGGATGGAACTGATGCAGAATCAGGAACCTCGTCTGAGCTTGAAGTTACTCAAGCTTTGCGCCGACTAGAGGTACAATTAAGTTTGAATGAGGACAGCTTTGAAGATATTGCTCCCTTCTGCAATAAGCACGAAGCTGCCCACGATCCAAACCCTCTACACAATCAAACGGTGATCAGCAATCAAGATCAATCTGCAGCTTTCTCTGGATCTGATGATCAAGGGCTATTTTATGATGAATATAAGGCAAGACAAGGTGATGGTGGTGAATGTTATCATGAACTAATAGACCATGGATACCCTGACGGAAATGAAAAGGCTTTATGGACAGGGGTGCTTGGATCATGCAAGTCCTCAACTGCTGTCAAGTTACCACCAAAAAATGTATACTTGACGGCTGGAAATGAAAATTCAGTATCTTTTCCGGGAAGGGTACTAGTACCAGTTTCCAACCAGGAAGAGAGTCACTGGCTCAATTTCAACAGTGATAATTCTCAAAGCTCAGCTGTTTTCTCACCACCTCAAGGGGTGGATGAAGTCAAATTTCCTGCATATTCTTCTATGGTGGAAACACGAGTAACTAATTCTGACTACTATGGAACATTCTTTGACCAAAGCCAAATAGTAGCACCTCTGGATGCAGATTCAAGCTTGACCATTGCACACAAACAGAAATTTACTATTAAGACATTCTCCCCAGAATGGGGTTATGCCACTGAGACCACTAAGGTCATCATTGTTGGGTCTTTTCTCTGTCATCCGTCAGATTCTACCTGGGCATGCATGCTTGGTGATGTTGAAGTTCCTGTTCAGATAATTCATGATGGTGTAATCTGTTGTGAAGCTCCACCTTACCTTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAAGTCAGAGAGTTTGAATATCGTGACAAGACCTATAGTTGCACCCAATGTACTCAATTGAAAACAGAAGCCACTAGAAGTCCTGAAGAGCTGTTATTACTTGTTAGATTAGGGCAGATGCTTCTTTCTACATCAACAATAAAGAATGACAACATAGAATCGGGAATTCCTCTCATAAAACAGAAAGCTGATGATGACTCATGGAGCCATATTATAGAGACTCTTCTAGTTGGTGGTGGAACGTCGACTAGTACTACTGATTGGCTTCTCGAAGAACTTCTAAAGGATAAGCTTCAACAGTGGCTTTCTTACAGATCTCAGGAAAGAGATGAAGAGACAGACTGCTCTTTGTCCAAGAAAGAGCAAGGCATTATTCATATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTTAGTTGTGGAGTGAATATAAATTTCCGTGACATCAGTGGGTGGACTGCCCTTCATTGGGCTGCCCGTTTCGGAAGGGAAAAAATGGTCGCTTCACTTGTAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAACTGCACAAGACCCAATCGGTAAAACTGCTGCATCTATTGCAGCCAGCAATGGGCACAAGGGACTAGCAGGATATCTTTCAGAGGTAGCTGTGACAAGCCACCTATCATCACTTGTACTGGAAGAGAGTGAATTATCTAAAAGTTCTGCCCAGCTTCAGGCAGATATGACTGTTACCAGTGTCTCCAAGGAAAATCTTGCTGCCAATGAGGATCAGGCGTCACTCAAACATACCTTGGCTGCTGTCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATCGGCTTTTCGGTCACATTCTTTTAGAAAACGGAGAGCAAGAGAAGGTATAAATAGTTGTGGTACGAGTGTAGGTGGCATTGGTAGCATTAAAGAAATTTCTGCTATGTCAAAACTTGCCTTTCGAAGCTCACGTGAACATAATTCAGCTGCTTTATCAATTCAGAAGAAATATCGCGGTTGGAAAGGTCGCAAAGATTTCTTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATTTTGGACAAGGTCGTGCTACGATGGAGAAGAAAAGGAGCTGGTTTACGAGGTTTCCGACCAGAGATGGACATTAATGAAAATGATGATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAGGTGGATGTAGAAATTGAAAAGGCTGTTTCACGGGTGATGTCCATGGTCGACTCACCAGATGCTCGTGACCAATATCGTCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACTTGTGGCGGGTACCAGTGACGAAGTATCATCAACCACTTCTGTGGGGAATGCCTTATTTATGGAAGATGACTTATATCCATTTCCCTAG 2967 0.4331 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHDKFLLTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPEYEHIVLVHYRNTSEGRLSSGGGAQLSPSSSSAFSQSPSPYSNQNPGSTSILVDSYEPNQSFSSPGTTEVTSDIFILNNKMDHMDGTDAESGTSSELEVTQALRRLEVQLSLNEDSFEDIAPFCNKHEAAHDPNPLHNQTVISNQDQSAAFSGSDDQGLFYDEYKARQGDGGECYHELIDHGYPDGNEKALWTGVLGSCKSSTAVKLPPKNVYLTAGNENSVSFPGRVLVPVSNQEESHWLNFNSDNSQSSAVFSPPQGVDEVKFPAYSSMVETRVTNSDYYGTFFDQSQIVAPLDADSSLTIAHKQKFTIKTFSPEWGYATETTKVIIVGSFLCHPSDSTWACMLGDVEVPVQIIHDGVICCEAPPYLPGKVTLCITSGNRESCSEVREFEYRDKTYSCTQCTQLKTEATRSPEELLLLVRLGQMLLSTSTIKNDNIESGIPLIKQKADDDSWSHIIETLLVGGGTSTSTTDWLLEELLKDKLQQWLSYRSQERDEETDCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLVASGASAGAVTDPTAQDPIGKTAASIAASNGHKGLAGYLSEVAVTSHLSSLVLEESELSKSSAQLQADMTVTSVSKENLAANEDQASLKHTLAAVRNVTQAAARIQSAFRSHSFRKRRAREGINSCGTSVGGIGSIKEISAMSKLAFRSSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRPEMDINENDDEDEDILKVFRKQKVDVEIEKAVSRVMSMVDSPDARDQYRRMLEKYRQAKAELVAGTSDEVSSTTSVGNALFMEDDLYPFP* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02700 988 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 959 - -
Phac2g02700 988 CDD IPT 426 511 - -
Phac2g02700 988 MobiDBLite consensus disorder prediction 133 184 - -
Phac2g02700 988 SMART ANK_2a 694 723 IPR002110 GO:0005515
Phac2g02700 988 SMART ANK_2a 655 684 IPR002110 GO:0005515
Phac2g02700 988 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Phac2g02700 988 FunFam Calmodulin-binding transcription activator 2 420 513 - -
Phac2g02700 988 Gene3D - 827 876 - -
Phac2g02700 988 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Phac2g02700 988 Pfam IQ calmodulin-binding motif 830 848 IPR000048 GO:0005515
Phac2g02700 988 Pfam IQ calmodulin-binding motif 853 872 IPR000048 GO:0005515
Phac2g02700 988 ProSiteProfiles Ankyrin repeat region circular profile. 655 681 - -
Phac2g02700 988 Gene3D Immunoglobulins 420 514 IPR013783 -
Phac2g02700 988 FunFam Calmodulin-binding transcription activator 2 827 875 - -
Phac2g02700 988 Gene3D - 546 720 IPR036770 -
Phac2g02700 988 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Phac2g02700 988 Pfam Ankyrin repeats (3 copies) 637 715 IPR002110 GO:0005515
Phac2g02700 988 Pfam IPT/TIG domain 426 509 IPR002909 -
Phac2g02700 988 FunFam Calmodulin-binding transcription activator 4 isoform A 536 720 - -
Phac2g02700 988 SUPERFAMILY Ankyrin repeat 625 717 IPR036770 -
Phac2g02700 988 ProSiteProfiles IQ motif profile. 851 876 IPR000048 GO:0005515
Phac2g02700 988 ProSiteProfiles IQ motif profile. 774 797 IPR000048 GO:0005515
Phac2g02700 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 874 IPR027417 -
Phac2g02700 988 SMART iq_5 772 794 IPR000048 GO:0005515
Phac2g02700 988 SMART iq_5 827 849 IPR000048 GO:0005515
Phac2g02700 988 SMART iq_5 850 872 IPR000048 GO:0005515
Phac2g02700 988 SUPERFAMILY E set domains 426 510 IPR014756 -
Phac2g02700 988 ProSiteProfiles Ankyrin repeat profile. 655 687 IPR002110 GO:0005515
Phac2g02700 988 SMART CG_1_2 12 130 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02700 Phac-Chr2 28502011 28511359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02700 5 960 CAMTA Transcription Factor Family AT1G67310 52.994 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac2g02700 CG-1 2.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02700 K21596 - gmx:100786880 1606.27