LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g02700	ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAAGCTCAAGCCAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGACAAGTTCCTGCTCACTCAAGAGCCCCCGCAACAGCCAACCAGTGGATCCTTGTTTCTATTTAACAAAAGAGTCCTGCGTTTCTTCCGGAAAGATGGTCATAACTGGCGCAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAACGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTATGCACACGGAGAGCAGAACCCTAGTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGAATATGAGCATATTGTTCTTGTGCATTATAGAAACACAAGTGAGGGAAGACTAAGTTCTGGAGGCGGTGCACAATTGTCACCAAGTTCCTCTTCTGCATTTAGTCAGAGTCCTAGCCCATATTCTAATCAGAATCCAGGGTCAACATCCATACTTGTTGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCTGGAACTACAGAAGTTACGTCTGATATATTCATTCTGAACAATAAAATGGATCACATGGATGGAACTGATGCAGAATCAGGAACCTCGTCTGAGCTTGAAGTTACTCAAGCTTTGCGCCGACTAGAGGTACAATTAAGTTTGAATGAGGACAGCTTTGAAGATATTGCTCCCTTCTGCAATAAGCACGAAGCTGCCCACGATCCAAACCCTCTACACAATCAAACGGTGATCAGCAATCAAGATCAATCTGCAGCTTTCTCTGGATCTGATGATCAAGGGCTATTTTATGATGAATATAAGGCAAGACAAGGTGATGGTGGTGAATGTTATCATGAACTAATAGACCATGGATACCCTGACGGAAATGAAAAGGCTTTATGGACAGGGGTGCTTGGATCATGCAAGTCCTCAACTGCTGTCAAGTTACCACCAAAAAATGTATACTTGACGGCTGGAAATGAAAATTCAGTATCTTTTCCGGGAAGGGTACTAGTACCAGTTTCCAACCAGGAAGAGAGTCACTGGCTCAATTTCAACAGTGATAATTCTCAAAGCTCAGCTGTTTTCTCACCACCTCAAGGGGTGGATGAAGTCAAATTTCCTGCATATTCTTCTATGGTGGAAACACGAGTAACTAATTCTGACTACTATGGAACATTCTTTGACCAAAGCCAAATAGTAGCACCTCTGGATGCAGATTCAAGCTTGACCATTGCACACAAACAGAAATTTACTATTAAGACATTCTCCCCAGAATGGGGTTATGCCACTGAGACCACTAAGGTCATCATTGTTGGGTCTTTTCTCTGTCATCCGTCAGATTCTACCTGGGCATGCATGCTTGGTGATGTTGAAGTTCCTGTTCAGATAATTCATGATGGTGTAATCTGTTGTGAAGCTCCACCTTACCTTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAAGTCAGAGAGTTTGAATATCGTGACAAGACCTATAGTTGCACCCAATGTACTCAATTGAAAACAGAAGCCACTAGAAGTCCTGAAGAGCTGTTATTACTTGTTAGATTAGGGCAGATGCTTCTTTCTACATCAACAATAAAGAATGACAACATAGAATCGGGAATTCCTCTCATAAAACAGAAAGCTGATGATGACTCATGGAGCCATATTATAGAGACTCTTCTAGTTGGTGGTGGAACGTCGACTAGTACTACTGATTGGCTTCTCGAAGAACTTCTAAAGGATAAGCTTCAACAGTGGCTTTCTTACAGATCTCAGGAAAGAGATGAAGAGACAGACTGCTCTTTGTCCAAGAAAGAGCAAGGCATTATTCATATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTTAGTTGTGGAGTGAATATAAATTTCCGTGACATCAGTGGGTGGACTGCCCTTCATTGGGCTGCCCGTTTCGGAAGGGAAAAAATGGTCGCTTCACTTGTAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAACTGCACAAGACCCAATCGGTAAAACTGCTGCATCTATTGCAGCCAGCAATGGGCACAAGGGACTAGCAGGATATCTTTCAGAGGTAGCTGTGACAAGCCACCTATCATCACTTGTACTGGAAGAGAGTGAATTATCTAAAAGTTCTGCCCAGCTTCAGGCAGATATGACTGTTACCAGTGTCTCCAAGGAAAATCTTGCTGCCAATGAGGATCAGGCGTCACTCAAACATACCTTGGCTGCTGTCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATCGGCTTTTCGGTCACATTCTTTTAGAAAACGGAGAGCAAGAGAAGGTATAAATAGTTGTGGTACGAGTGTAGGTGGCATTGGTAGCATTAAAGAAATTTCTGCTATGTCAAAACTTGCCTTTCGAAGCTCACGTGAACATAATTCAGCTGCTTTATCAATTCAGAAGAAATATCGCGGTTGGAAAGGTCGCAAAGATTTCTTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATTTTGGACAAGGTCGTGCTACGATGGAGAAGAAAAGGAGCTGGTTTACGAGGTTTCCGACCAGAGATGGACATTAATGAAAATGATGATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAGGTGGATGTAGAAATTGAAAAGGCTGTTTCACGGGTGATGTCCATGGTCGACTCACCAGATGCTCGTGACCAATATCGTCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACTTGTGGCGGGTACCAGTGACGAAGTATCATCAACCACTTCTGTGGGGAATGCCTTATTTATGGAAGATGACTTATATCCATTTCCCTAG	2967	0.4331	MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHDKFLLTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPEYEHIVLVHYRNTSEGRLSSGGGAQLSPSSSSAFSQSPSPYSNQNPGSTSILVDSYEPNQSFSSPGTTEVTSDIFILNNKMDHMDGTDAESGTSSELEVTQALRRLEVQLSLNEDSFEDIAPFCNKHEAAHDPNPLHNQTVISNQDQSAAFSGSDDQGLFYDEYKARQGDGGECYHELIDHGYPDGNEKALWTGVLGSCKSSTAVKLPPKNVYLTAGNENSVSFPGRVLVPVSNQEESHWLNFNSDNSQSSAVFSPPQGVDEVKFPAYSSMVETRVTNSDYYGTFFDQSQIVAPLDADSSLTIAHKQKFTIKTFSPEWGYATETTKVIIVGSFLCHPSDSTWACMLGDVEVPVQIIHDGVICCEAPPYLPGKVTLCITSGNRESCSEVREFEYRDKTYSCTQCTQLKTEATRSPEELLLLVRLGQMLLSTSTIKNDNIESGIPLIKQKADDDSWSHIIETLLVGGGTSTSTTDWLLEELLKDKLQQWLSYRSQERDEETDCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLVASGASAGAVTDPTAQDPIGKTAASIAASNGHKGLAGYLSEVAVTSHLSSLVLEESELSKSSAQLQADMTVTSVSKENLAANEDQASLKHTLAAVRNVTQAAARIQSAFRSHSFRKRRAREGINSCGTSVGGIGSIKEISAMSKLAFRSSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRPEMDINENDDEDEDILKVFRKQKVDVEIEKAVSRVMSMVDSPDARDQYRRMLEKYRQAKAELVAGTSDEVSSTTSVGNALFMEDDLYPFP*	989

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g02700	988	PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	8	959	-	-
	Phac2g02700	988	CDD	IPT	426	511	-	-
	Phac2g02700	988	MobiDBLite	consensus disorder prediction	133	184	-	-
	Phac2g02700	988	SMART	ANK_2a	694	723	IPR002110	GO:0005515
	Phac2g02700	988	SMART	ANK_2a	655	684	IPR002110	GO:0005515
	Phac2g02700	988	ProSiteProfiles	CG-1 DNA-binding domain profile.	9	135	IPR005559	GO:0003677
	Phac2g02700	988	FunFam	Calmodulin-binding transcription activator 2	420	513	-	-
	Phac2g02700	988	Gene3D	-	827	876	-	-
	Phac2g02700	988	Pfam	CG-1 domain	15	128	IPR005559	GO:0003677
	Phac2g02700	988	Pfam	IQ calmodulin-binding motif	830	848	IPR000048	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g02700	Phac-Chr2	28502011	28511359	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g02700	5	960	CAMTA Transcription Factor Family	AT1G67310	52.994	0.0	914

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CAMTA	Phac2g02700		CG-1	2.4e-49	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g02700	K21596		-	gmx:100786880	1606.27

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