Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02689 ATGGAAATCGTTCGTCCTCAGAGTCGCAGGAACTTCTTGTCTTCCTCTAACGACGCCGTTTCTGTTCCCACCATTCCCCTCTATCGCTCTGCTCCCTCACTCGAAGTTAGGCTCGAGGAGTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCCGATGGTATGTCGCGGGGGAAAAAACCGGAAGAAATGGAAAATTTGGTAAAGGACCTGTGGAAAGTGAATATGAGACACCAACACGCATCTGAAGTTCTGAACAAGGATATTATATCTCATTTTGTTCTCCGTCTTGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAATCTTCACTCTTCCGCCACCGATTTCGTGTTCTGAATGCTGAAGCTCAGAGGGCAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAGGAGAAATTGGGACAAGTTGCACGCTCTATGGGTCAACCTGCACCCACTGCTGATGCTATCTTCTACAAGGTTCCGTTTGAAGAAGTTCCAGAGCTTGTGGCTGGGCGGAAAGTATTAATTAGTCAAGGATATGCATATGTTGCAATGAATCAGATCGTTTCACTTGTAGCCACACTATTCCGCAGTCAGTTATCAAAGACACTCATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTGCTCAAGTTATCTGGGTCCTGACTATTCTCAGTCAAGAGAATATGCTGATATATCACTAAAGGACATTGATCAAGTTGCCAAGAATTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGGTTGAATCTGGAGGATGCACTTGCGTTTTGGAGGGCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAAAAACAATACGCTTACAGCATACGTCATAATTATGGAAAAGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTTCAAAGATTATCTCATCGACTCCTGGAACGGGAGATCATCATGGTTGCCCCTATCGACATTTCAGCGAGGAGAATCTGAGAGCTGCTCTGGACCGAATGGGGGTAAACAGTCGAGCAATGGAAGATGTGATAGATAAAGCGAGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCGTGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTAAAAAGATATTACAGTCAAAGAAGGATTCTTCAACCTAG 1374 0.441 MEIVRPQSRRNFLSSSNDAVSVPTIPLYRSAPSLEVRLEEFESFAIDRLRVLKGISDGMSRGKKPEEMENLVKDLWKVNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESSLFRHRFRVLNAEAQRAVMEEFDLPYRAVSNVEFESIKEKLGQVARSMGQPAPTADAIFYKVPFEEVPELVAGRKVLISQGYAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDYSQSREYADISLKDIDQVAKNSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLEDALAFWRAEFSKKVGLEKFEKQYAYSIRHNYGKEGKRTDYTPYSCSKIISSTPGTGDHHGCPYRHFSEENLRAALDRMGVNSRAMEDVIDKARNRHYQLACTLTFEALHGVPCDAGINHPNQYFSDSKKILQSKKDSST* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02689 457 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Phac2g02689 457 FunFam DNA primase large subunit 5 250 - -
Phac2g02689 457 PIRSF DNA_primase_large 2 457 IPR016558 -
Phac2g02689 457 Gene3D - 4 250 - -
Phac2g02689 457 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
Phac2g02689 457 PANTHER DNA PRIMASE LARGE SUBUNIT 21 453 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02689 Phac-Chr2 28313293 28329393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02689 1 456 Core DNA Replication Machinery Family AT1G67320 66.870 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02689 K02685 - gmx:100806321 852.818