Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02677 ATGAAAGAGAGAAATGATAATGGTGAGAAACTGGATGAGGTTATGCTACCGGGTTTCAGGTTTCATCCAACAGACGAGGAGCTTGTTGGATTTTACCTTAAGAGAAAGATTCAGCAGAGTCCTCTTTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAGTATGATCCTTGGGATCTTCCAAAGTTGGCCACCACTGGGGAGAAAGAGTGGTATTTCTACTGCCCCAGAGACAGAAAGTACAGGAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAGGCTACAGGGACGGATCGCCCTATATATTCCTCGGAGGGTTCCAAGTGTATTGGTCTGAAGAAGTCCCTTGTGTTCTACAAAGGTAGAGCTGCCAAAGGGATTAAAACTGATTGGATGATGCATGAGTTTAGACTACCATCTCTCAATAACCCATCCTCATCCCCTAAGAAGTTCATGGACAAGACCATTCCTGCTAACGAATCCTGGGCAATCTGCAGAATCTTCAAGAAAACCAATGCTACAGCACAAAGAGCTCTCTCTCACTCTTGGGTCTCACCCTTACCTGAAACCACCACTTCAGATCATATGTTAGGCACTGATAGATATGGCAACCAATTTTCTACAGCAAACATGCTATTTCCAAAGAAAACTAGCTTACCCAGCCAGTTTTGTACTTTTAATCACAATGACACACAACACTCAACCACTACTAGTAGCACCCCTTGTCCTATAGATATTCTAACTTCTTATAACAAACCAATTATTAATCCATTAATGCTTTACAAGCCCTTAGATCTGTTACCCATTTCAAATGGAGACCTTAGCACTGGCTTAATATTCTCATGTCCTCTTGAAACTTCAACAAACAGTGCTAAATCTTCGATGGATGTCTCTTCATTGCTAATGAGTACCTCAACTTCTGTGCTTGGGGAATTTAATAGTAAGACCTCTGAGGGATCGAGCACAAACTTTGGTGGGTTACAGGAGCATGGCTACCAAATACCACTACTACGTGAAATGCAAGGGAGTTTTGGCAACCACGATGACAACGTATTGATAAAGATTCCTAATGTGGATGTGGCTCGTGTTGGTGAGCAACAATCGGAGACAGTGCGATCCATTGGGTTTCCATTCAGTATTGGCGATGCATGGAAGCCAAATGTGCTTTGGGATAGTTCATCTTTGTCCTTGTGA 1206 0.4279 MKERNDNGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQSPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLNNPSSSPKKFMDKTIPANESWAICRIFKKTNATAQRALSHSWVSPLPETTTSDHMLGTDRYGNQFSTANMLFPKKTSLPSQFCTFNHNDTQHSTTTSSTPCPIDILTSYNKPIINPLMLYKPLDLLPISNGDLSTGLIFSCPLETSTNSAKSSMDVSSLLMSTSTSVLGEFNSKTSEGSSTNFGGLQEHGYQIPLLREMQGSFGNHDDNVLIKIPNVDVARVGEQQSETVRSIGFPFSIGDAWKPNVLWDSSSLSL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02677 401 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Phac2g02677 401 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Phac2g02677 401 FunFam NAC domain-containing protein 35 24 177 - -
Phac2g02677 401 SUPERFAMILY NAC domain 14 174 IPR036093 GO:0003677|GO:0006355
Phac2g02677 401 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Phac2g02677 401 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02677 Phac-Chr2 28217245 28219064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02677 1 318 NAC Transcription Factor Family AT1G26870 58.559 9.93e-117 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g02677 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02677 - - vra:106768003 734.176