Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02675 ATGAGACAGCTACCGTCTTCGTCATCTTCTTCTTCTTCCACTTGTGAATGGACCCATGATGTGTTCCTCAGTTTCAGAGGCGATGACACTCGAAGTGGCTTCACTGGCAACCTACACAAGTCTCTTTGTGACAGGGGAATTCACACCTTCATAGATGATGAGGGGCTCAGAAAAGGGGAAGAGATTCGACCTGCTCTTTTCAAGGCTATTGAGCAGTCTAGAATTGCCATTGTTGTTTTCTCTGAAAATTATGCTGAGTCAACTTATTGTCTTGAAGAACTTGTCATGATCCTTGAGTGCATAGTGAAAAAGGGTCGACTTCTTTGGCCAGTGTTTTACGGGGTTACCCCATCTTATGTGCGGTTCCAGAAGGGTTCTTATGGGAAAGCATTGGCCAAGCTTGGAGAAAGATTCAAGAATGACCAGGAGAAGCTGCAAAAATGGAAGCTAGCTCTACAAGAAGCTGCTGATTTGTCTGGTTGGCATTTCAAACTCAAACAAGGGTATGAACATGAACTAATTCGGGCAATTGTTGAAGAGGTTTCCAAAAGAATAAATCGTAGCCCTTTACATGTGGCTAATTATCCAATTGGACTGAAGTCTAGAGTACAAGAGGTGAACGCACTTTTGGATGTTGGATCTAATGGAGGAGTAAGCATGGTTGGGATTTATGGAATCGGGGGAATAGGTAAGACTGCAATCGCATGTGCAGTGTACAATGTCATTGCTGATCAATTTGAAGGTCAGTGTTTCCTTGGTGATATTAGACAAAAATCAATGAAGTATGACTTAGTACAACTTCAGGAGATAATACTTTCTGAAATGGTTGGGGAGAAGAGTATCAAGTTGGGGAGTATTAATAAGGGAATGGCAGTATTGAAAAGCAAGCTTCAAAGAAAGAAAGTTCTTTTGATTCTTGATGATATTGATAAATTGGAGCAGTTAAGGGCACTTGCTGGTGATCTTTCCTGGTTTGGTGATGGCAGCAAAATCATTGTCACGACAAGGAATAGACATTTTTTACGTGTACATGGTGTTGAAAGAACATATGAAGCAAAAGGATTAGATGATAAAGAAGCACTTGAGTTGTTTAGTTGGCATGCTTTTAAAAGCAATGAAGTTGGTCCAGGTTACTTGGATATCTCCAAGCGTGCAGTATTTTATTCCAATGGCCTTCCATTGGCCTTGGAAATAATAGGTTCTAACTTGAATGGTATAACAATGTCTGAATGGGAAGCCGCATTAGATACCATTGAAAGAATCCCAGATGAAGATATTCAGGAAAAACTAAAAGTAAGCTATGATGGTTTGAAGGGAAATGAGAAAGATGTTTTCCTTGACATTGCTTGTTTCTTAAGAGGCTACCATTTGAAAGATGTCATAAGTTTATTGCTCCAAAGTCGTGGTTTCTCACCTGAGTATGTTATTCGCATGTTGGTAGATAAATCTCTCATAAAGATCGATCAATATGGTTTTGTGCTAATGCATAACTTGGTAGAGGACATGGGCAGAGAAATTGTCAGGCAAGAATCACCATCAGAACCTGGAAAACGCAGTAGATTATGGTTTTATGAGGATATTGTTGATGTTTTAGAAAATGACAAGGGAACTGATACAATTGAAGTAATCATGCTACACTTGCCAAAGAACAGGGAAGTTCTATGGAATGGAAGTGAGCTCAAGAAGATGACAAACTTAAAAATGCTAAGTATTGAAAATGCTGACTTTTCTAGAGGCCCTGAATTTCTCCCAAGTAGTTTGAGAGTACTAAAGTGGCGGGGATATCCTACACAGTCTCTGCCACCTGAATATGATCCAAGGAGACTTGTTATGTTAGACTTGTCTCTGAGTCGCAGTATATTGTGCAAACAACTCAACCTCATGAAGTTCGAGTCTTTGAGTGAAATGGTTTTAAGAGGATGCAGATTCATAAAACAGGTACCTGACATGTCTGGAGCCAAAAATTTAAGAAAGCTGTGTCTTGATAACTGCAAGAGTTTAGTGGAAGTTCATAATTCCATCGGACTTCTTGACAAACTAAAATGGTTCACTGCTATTGGATGCACCAGTCTAAGGACTTTTCCCCATAGCTTCAAGTTAACATCACTTGAATATCTGTCTCTCAGAAAATGCTCAAGACTCCAGCGTTTGCCATACATATTAGAAGAAATGAAACATATGAAAAATCTTGACCTGTGTGGAACTGATATTGAAGAATTGCCATATTCGTTTAGGAAACTCACTGGGCTTAAATATTTAGTACTAGACAAGTGCAAGAGGCTTAATCAGATCCCAATAAGTATTTTGATGTTACCAAAACTTGAGAGATTGACAGCTGTAAAATGTGGACGATATGTAAATTTGATCCTTGGTAAAAGTGAAGGACAAGGAAGATTTGTTTCATCCGAGTCTTTGAGAGATTTTAGATTAAACTACAATGATTTGACACCCACCACCAGCTTCCCCAATGTAGAATTCTTAGTCCTAACTGGCTGTGCTTTCAAAGTCCTTCCCGAATGCATCAGTCAATGTCGCTTTCTAAAGAATCTAGTTTTGGACAACTGCAAGGATCTTCAAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTGTCGGCAATAAATTGCACATTATTGTCCCATGAGTCTCAAAACATGTTGTTGAATCAGAGATTACATGAGGGTGGGGGCACAGATTTTTCCCTTCCAGGAACAAGGTTACCAGAATGGTTTGATCATTGTACTAGGGGGCCATCCCTGTCTTTCTGGTTTCGTAACAAATTTCCAAGGATGGCTCTAGCTGTTGTTGGAGTTTTAGACAAGCAAGGCAGTTTTCCCATGTCCAGATTCCACCTGCTCATCAATGGCATTCAAAAGCTGCATTGCCATTTCACGGTGCAATCAAAATTAATCGCATATCATATATTCTTGTCCGATGTGCAGCTCAAGTCCTACAATGGTGGATTGGAAAGTGTGTATGGGGAGGATGGGTGGAACCATCTTGAGGTTTCATACGTGGGACCAAGAGCCTTTCCACATTCATGCAGAACCAAGAAAGGAACCATTAAGTGGATGGGAGTTCATGTTTACAAGAATAAAACAAACATGCAGGATATCCGGTTCATAAATCCTTGGTGTCCAAAAAGAGCATATAGTGAAGTTTCCAAGCCTGATTTGGAAGAAAGTTTTCAGTCATTGCCCAAAAGAATCCGTGTATCACAACGCAAGGAAATTTGTGAGGCACCACGTACGAAGCAGCATGAAGCTAAGCGTGGTTATCATGGTGTATCACAGAGGCTATGGTTGGCAATTTGTAGCATTGTAGCTCCTCCAGATGTTAAAGTCCTGATGTGGAATATTTGCCGAGATGATTTGCCAACTTTTGAATACCTTTTCAGGAGAAAGCTTGTAATTAGTCCACTCTGCCCCATTTGTGGAACGGAGCCTGAAACAGTTGAACATGTCTTCCTGTTTTGTCCATGGACACGACCCCTTTGGTTCGGAAGTTATTTCCAGTGGTGCGTTGATGTTAAAGAAGTTCAAAGCTTTCAACTTTGGCTTTGGCATAAACTGATGGAGATTCAAAGGGTATATCCAGAAAATGCCAACCAAATATCTGCTCAGGTAGGAAGTATTTGTTGGTCTATCTGGAAAGGAAGGAATGAATTTGTTCTTGAGGGCAAACCTGTCGATCCTTTGATTTTAAGGTAG 3711 0.4018 MRQLPSSSSSSSSTCEWTHDVFLSFRGDDTRSGFTGNLHKSLCDRGIHTFIDDEGLRKGEEIRPALFKAIEQSRIAIVVFSENYAESTYCLEELVMILECIVKKGRLLWPVFYGVTPSYVRFQKGSYGKALAKLGERFKNDQEKLQKWKLALQEAADLSGWHFKLKQGYEHELIRAIVEEVSKRINRSPLHVANYPIGLKSRVQEVNALLDVGSNGGVSMVGIYGIGGIGKTAIACAVYNVIADQFEGQCFLGDIRQKSMKYDLVQLQEIILSEMVGEKSIKLGSINKGMAVLKSKLQRKKVLLILDDIDKLEQLRALAGDLSWFGDGSKIIVTTRNRHFLRVHGVERTYEAKGLDDKEALELFSWHAFKSNEVGPGYLDISKRAVFYSNGLPLALEIIGSNLNGITMSEWEAALDTIERIPDEDIQEKLKVSYDGLKGNEKDVFLDIACFLRGYHLKDVISLLLQSRGFSPEYVIRMLVDKSLIKIDQYGFVLMHNLVEDMGREIVRQESPSEPGKRSRLWFYEDIVDVLENDKGTDTIEVIMLHLPKNREVLWNGSELKKMTNLKMLSIENADFSRGPEFLPSSLRVLKWRGYPTQSLPPEYDPRRLVMLDLSLSRSILCKQLNLMKFESLSEMVLRGCRFIKQVPDMSGAKNLRKLCLDNCKSLVEVHNSIGLLDKLKWFTAIGCTSLRTFPHSFKLTSLEYLSLRKCSRLQRLPYILEEMKHMKNLDLCGTDIEELPYSFRKLTGLKYLVLDKCKRLNQIPISILMLPKLERLTAVKCGRYVNLILGKSEGQGRFVSSESLRDFRLNYNDLTPTTSFPNVEFLVLTGCAFKVLPECISQCRFLKNLVLDNCKDLQEIRGVPPKIKYLSAINCTLLSHESQNMLLNQRLHEGGGTDFSLPGTRLPEWFDHCTRGPSLSFWFRNKFPRMALAVVGVLDKQGSFPMSRFHLLINGIQKLHCHFTVQSKLIAYHIFLSDVQLKSYNGGLESVYGEDGWNHLEVSYVGPRAFPHSCRTKKGTIKWMGVHVYKNKTNMQDIRFINPWCPKRAYSEVSKPDLEESFQSLPKRIRVSQRKEICEAPRTKQHEAKRGYHGVSQRLWLAICSIVAPPDVKVLMWNICRDDLPTFEYLFRRKLVISPLCPICGTEPETVEHVFLFCPWTRPLWFGSYFQWCVDVKEVQSFQLWLWHKLMEIQRVYPENANQISAQVGSICWSIWKGRNEFVLEGKPVDPLILR* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02675 1236 SUPERFAMILY "Winged helix" DNA-binding domain 425 532 IPR036390 -
Phac2g02675 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Phac2g02675 1236 Gene3D - 13 189 IPR035897 -
Phac2g02675 1236 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
Phac2g02675 1236 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 767 IPR044974 GO:0006952
Phac2g02675 1236 Gene3D - 354 438 IPR042197 -
Phac2g02675 1236 PRINTS Disease resistance protein signature 296 310 - -
Phac2g02675 1236 PRINTS Disease resistance protein signature 220 235 - -
Phac2g02675 1236 PRINTS Disease resistance protein signature 389 403 - -
Phac2g02675 1236 PRINTS Disease resistance protein signature 698 714 - -
Phac2g02675 1236 Pfam NB-ARC domain 202 430 IPR002182 GO:0043531
Phac2g02675 1236 SUPERFAMILY L domain-like 511 885 - -
Phac2g02675 1236 ProSiteProfiles TIR domain profile. 17 185 IPR000157 GO:0007165
Phac2g02675 1236 SMART till_3 18 158 IPR000157 GO:0007165
Phac2g02675 1236 Gene3D Ribonuclease Inhibitor 721 916 IPR032675 -
Phac2g02675 1236 Gene3D Ribonuclease Inhibitor 545 720 IPR032675 -
Phac2g02675 1236 Pfam TIR domain 19 186 IPR000157 GO:0007165
Phac2g02675 1236 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 187 - -
Phac2g02675 1236 Pfam zinc-binding in reverse transcriptase 1104 1166 IPR026960 -
Phac2g02675 1236 Gene3D - 190 348 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02675 Phac-Chr2 28203342 28210117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02675 19 782 WRKY Transcription Factor Family AT4G12020 33.545 2.46e-91 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02675 - - var:108319971 2279.6