Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02671 ATGGACCTGACCTCCAGCAGTACCCACCCAGTACAAACCTTGGATGCAGATACTAGGATCACACCACCCATCAACCCCACCAACAATACCACCCCAAAGTCTCTATCTTTCACCAACGGCACACCCAAGCGCCACCCCACCACCATCGGTGCTCCACTGCCACAACCACCGCCCATGGTGGTTGCCTACAAAGAATGCCTCAAAAACCACGCCGCCAGCCTAGGTGGCCATGCACTCGATGGCTGTGGCGAGTTCATGCCTTCCTCCTCAACCAACCCCACCGATCCTCGCTCCCTTAAGTGCGCCGCGTGTGGCTGCCACCGCAACTTCCACCGCCGTGATCCTCAAGAACACAACAACCTCAACTACAACATTCACAGCACCAACACCGCCGCCGCCGCCGCCAACAATAACCCCACTTTTCTAAGTTGCATCTACACCCCTTCAGCACCAGCACCAATCTCTCAGCGAGCCATGAGCCAAAGCACGAGTCCGAGCCTGAGTTCGAGCCCGAGTCACAGTCCGAGCCCAATGTCAAGCCCCTCACCTCCTCCACTCTCCCACGTGCCACCGTACCACGCTTCAGCACCCCACATGCTTTTAGCCCTCGGCACTGGCTATTCTACACCCTCCGATGAACATCACCACCACAGAGGCCTCACCTTTTCGAGCGTGATGTTGAAGAGCGAGAACCCGAAGAAGAGATACAGGACCAAGTTCAGCAAAGAGCAGAAGGAGAAGATGCATAGCTTCTCTGAGAAACTGGGGTGGAGAATGCAGAAAGGGGATGATGGATTGGTCCAGCAATTCTGCAATGACATTGGGGTCTCTAGAGGGGTATTCAAGGTGTGGATGCACAACAACAAGAACACTTTTAGGAGAAGATTGGATCAAGGGGAAAATGCAAATCCAAACGCAAATGCAAATTCTTCTCAAAGTGTTGGGGATCATGATGACGGCAATAATACCAGTGGTGGAGGTGGTTTTGACAGTGATATCAACAACCCCTACAATCCAAATAGCAACAACAACAATGACATTCACATGAATGAAGAAGATGATGGATGTCGCAATGTTCATGTTTCTCTTAATGGGTTGTCATCTTAG 1107 0.5194 MDLTSSSTHPVQTLDADTRITPPINPTNNTTPKSLSFTNGTPKRHPTTIGAPLPQPPPMVVAYKECLKNHAASLGGHALDGCGEFMPSSSTNPTDPRSLKCAACGCHRNFHRRDPQEHNNLNYNIHSTNTAAAAANNNPTFLSCIYTPSAPAPISQRAMSQSTSPSLSSSPSHSPSPMSSPSPPPLSHVPPYHASAPHMLLALGTGYSTPSDEHHHHRGLTFSSVMLKSENPKKRYRTKFSKEQKEKMHSFSEKLGWRMQKGDDGLVQQFCNDIGVSRGVFKVWMHNNKNTFRRRLDQGENANPNANANSSQSVGDHDDGNNTSGGGGFDSDINNPYNPNSNNNNDIHMNEEDDGCRNVHVSLNGLSS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02671 368 FunFam Zinc-finger homeodomain protein 2 221 294 - -
Phac2g02671 368 MobiDBLite consensus disorder prediction 298 353 - -
Phac2g02671 368 MobiDBLite consensus disorder prediction 176 191 - -
Phac2g02671 368 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 63 114 IPR006456 -
Phac2g02671 368 SUPERFAMILY Homeodomain-like 228 294 IPR009057 -
Phac2g02671 368 MobiDBLite consensus disorder prediction 155 175 - -
Phac2g02671 368 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Phac2g02671 368 NCBIfam homeobox domain, ZF-HD class 233 290 IPR006455 -
Phac2g02671 368 MobiDBLite consensus disorder prediction 155 193 - -
Phac2g02671 368 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Phac2g02671 368 Gene3D - 224 293 - -
Phac2g02671 368 MobiDBLite consensus disorder prediction 1 45 - -
Phac2g02671 368 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 43 291 - -
Phac2g02671 368 MobiDBLite consensus disorder prediction 1 55 - -
Phac2g02671 368 MobiDBLite consensus disorder prediction 298 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02671 Phac-Chr2 28146215 28148302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02671 49 292 ZF-HD Transcription Factor Family AT1G69600 46.614 4.02e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac2g02671 ZF-HD_dimer 5.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02671 - - vum:124843063 604.749