Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02669 ATGAGCGATCATCTGGTGCTGTTCGTGGACCGTCTGGTACGGCCCGTGCCGGTGGTTGAGCCGCTGGCCCAGCACCCGGTCCAGCCCTCCCCCGAGCCCTCGACCCCCGTCGATGAGGCCGCGGCAGGCCCCTCCGGCTCCGCTTCGGTGGCCGAGGACGACAGCGACGACGAGGACTCGCTGCTGCTGCCCTTGGCGGAGTGTCGCATTTGCCAGGAGGAGGATAGCATCAACAATTTAGAAACGCCCTGCTCCTGCAGCGGTAGTCTTAAGTATGCTCATAGAAAGTGCGTCCAGCATTGGTGTAATGAGAAAGGAGACATAATTTGTGAGATTTGTCATAAGTCGTATGAACCTGGTTATACTGCACCACCACCTCGTCCTCCGCCTGAAGAAACTACCATTGATATAGGTGGAGGCTGGACAATCTCTGGCATGCCATTGGATTTGCGTGACCCCCGACTCTTGGCAATTGCAGAGGCAGAACGTCAATTCTTGGAAGCTGAATATGATGGATATGCTGCTTCAAATGCCAGTGGAGCTGCATTTTGTCGTTCAGTTGCTCTGATTGTAAGACACATTAATCTTGAAATTAAGTCATATGTATGTCCACCCGTAATACATTTTCCAGAGGCCATGTTGTTTGACACTTGA 654 0.5291 MSDHLVLFVDRLVRPVPVVEPLAQHPVQPSPEPSTPVDEAAAGPSGSASVAEDDSDDEDSLLLPLAECRICQEEDSINNLETPCSCSGSLKYAHRKCVQHWCNEKGDIICEICHKSYEPGYTAPPPRPPPEETTIDIGGGWTISGMPLDLRDPRLLAIAEAERQFLEAEYDGYAASNASGAAFCRSVALIVRHINLEIKSYVCPPVIHFPEAMLFDT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02669 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 122 IPR013083 -
Phac2g02669 217 MobiDBLite consensus disorder prediction 23 58 - -
Phac2g02669 217 CDD RING_CH-C4HC3_MARCH 68 114 - -
Phac2g02669 217 FunFam RING/FYVE/PHD zinc finger protein 56 124 - -
Phac2g02669 217 Pfam Protein of unknown function (DUF3675) 119 191 IPR022143 -
Phac2g02669 217 SMART ringv_2 67 114 IPR011016 GO:0008270
Phac2g02669 217 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 192 IPR033275 -
Phac2g02669 217 Pfam RING-variant domain 68 113 IPR011016 GO:0008270
Phac2g02669 217 Coils Coil 156 176 - -
Phac2g02669 217 ProSiteProfiles Zinc finger RING-CH-type profile. 60 120 IPR011016 GO:0008270
Phac2g02669 217 SUPERFAMILY RING/U-box 67 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02669 Phac-Chr2 28101171 28104193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02669 56 114 C3H Transcription Factor Family AT2G37950 41.935 5.48e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02669 - - ahf:112734090 293.508